Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00956 ATGGAGAGATCCTATGATGTCGTCTTTGTTTTTCTCCTTTGTCTCTTCCTGTCCCAACCAGCAAGATCACAAGAAGACGATTCACAGGCACTTCTGGCATTGAAATCCTCCATAGACGCTCTCAACAAGCTTCCATGGCGAGAAGGAACCGACGTGTGCACGTGGTTGGGGGTCAGAGACTGCTTCAACGGAAGAGTCAGGAAACTAGTTCTGGAACACTCCAATTTAACAGGTCCTCTGGATTCCAAGATCTTGGGCCGTTTGGACCAGCTCCGAGTCCTCAGTTTCAAAGGAAACTCACTCTCCGGCGAAATCCCCAATCTCTCCGCCTTGGTCAACCTCAAATCGATTTTCCTCAACGAAAACAACTTCTCCGGCGAGTTTCCCGCCTCGGTCGCGTTCCTCCACCGCGTGAAGGTCATTGTTCTGTCGCAGAACCATATCTCCGGCGACATTCCGGCGTCGCTGCTGAATCTGCGGCGACTGTACGTTCTCTACTTGCAAGACAACGCGTTCACCGGACGCATTCCCGGTTTCAACCAGAGCAGCCTCAGGTATTTAAATGTGTCCAACAACCGGCTCTCCGGCGAGATTCCGGTGAGCTCGGCATTGATCCGGTTCAATGCGTCGTCGTTTTGGGGGAACCCGGGGCTCTGCGGGGAACAGATAGAAGAAGCATGCAAAAACGGTTCATTGGCGCCATCGACAAGCCCTAGTTATCCGTTGATACCAAGGACGATGGGGAAATCGTCGACGTCATCATTGAACCGCACGAAGTTGATAAAAATAATTGGAGGGAGCGTGGGTGGAGTTGTTTTGGTATTAGTTTGCATGGCTGTGGTGTGGGTTGTGATTTGCaagaagaagaagaagaagaagaagaagaagGGTGGTGCAGAAGTGGCAGAAGGGGAAGTTGGTGTGGCGGGAGGAGGGGGAGAAGAAGAAGGGGGTTTTGCGTGGGAAAATGAGGGTGTAGGGAAGCTGGTGTTCTGCGGAGGAGGGGATCGGGAGATGAGTTATAGTTTGGAGGAATTGCTCAAGGCATCGGCGGAGACATTGGGGAGGGGTATAGTGGGAAGTACGTATAAGGCAGTGATGGAATCGGGGTTCATAGTTACTGTGAAGAGGTTGAAAGATGCTAGGTATCCTGCCTTGGAAGAGTTCAGGGCTCACATTCAAGTCCTTGGGAGCCTCACCCACCCTAACCTGGTCCCACTCAGGGCTTATTTCCAGGCTAAGGAGGAACGCCTCCTCGTTTATGATTACTTTCCTAATGGCAGCCTCTTCTCCCTTATTCACGGATCAAAAACATCTGGTGGGGGGAAGCCTCTTCACTGGACATCCTGCCTTAAAATTGCAGAAGATCTAGCAACAGGCATGCTATACATCCACCAGAACCCTGGCTTGACACATGGAAACCTGAAATCTTCTAATGTATTGTTGGGTTCTGACTTTGAGTCATGTCTTACTGATTATGGTCTCACTGTGTTCCTTAATCCTGACTCAATGGATGAGCCTAGTGCCACTTCTTTATTCTATAGAGCACCCGAATGCCGCAACTTTCAAAGGTCACAAACTCAACCAGCAGATGTATACAGTTTTGGGGTCCTTCTTCTTGAGCTTTTAACCGGCAAAACACCCTTCCAAGACCTTgttcagacatacggttcagacatacCTACGTGGGTTCGGTCAGTGCGCGAAGAAGAGACCGAGTCCGGGGATGATCCTGCCTCAGGCAATGAAGTATCTGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCAATGGCATGTGTTTCACTAGTACCAGAGAACAGGCCTACAATGAGAGAGATACTGTTCAAAGCTTTCCAAGGGAAGAACACCAGAGCATATGATTGCGACAAGCAGAAGCCTCCCTCAGCAAGCGTAGTGTTAGAGAGAGAAAGAGAAGAAAGAAAAAAGGCACTACCGTCACCACAACCAACTAGGCCTCGGTCGGAAAGTTGCTACAAAAAAGGTTTCGCCTTCTGGGTCACTCTTTACTTTTCTGGGATCTCCATTTCTGAACTAAACCTTATCTGGATGGTTGTTGATGCTAGTTGTGGCTTAAGGCGTGCAATATCATTTCAACCTGGTGGTGGTGCTATTAACCGCTTGTCCGAGATGGTTCCTATGGGTAATTATTTTGGGCTAAGTAGTTCGTCTGAGATGATGATATATTCTGGGAATTCAAGCATCATTAACAGTAGTAATCCTGTCATGGGTCAAATGAGTCAAGCTGGTAATCTATCCAGTTCCTCGCTTCTTCTCGATTCGGTCCCGGGGCTGAAGCACGACACAGGGTTGGCTGTTGAGTGGTCTGTTGATGAACAGTACAGATTGGAAGAAGGCCTTGCCAAATATGCTGATGAGCCAAGTATCATGAGGTATATCAAAATTGCTGCCCTGTTGCCAGATAAAACTGTTCGTGATGTTGCTTTGAGGTGTAGATGGTTGACAAGAAAGCGAAGAAAATCAGAAGAACACAATCTGGGGAAAAAGGTCAATAATAGAAAGGATAAGCCAGTGGAATTAGCTTCAAAGACGAATTTACATTCAGCTCTGCCCTCAAGCATGGCTACATATCCTCGCATGTCACACCATATGGACCAAAGTCAACAGATACAATATGATGGTATTTGTAGCCCTTTGAAGCAACTCATGGAGCAGAATGCTCAAGCGTTCAATCAAATCACTGCCAATTTGTCTACTTACAAGTTGCAGGATAATATCGACCTCTTCTGCCACACAAGGCACAATATTAATACCATTCTTAATAATATGAAACATAGCGGGCAAAGTGCTGACTCCATCAAAATTTCCAACACAAATCTAAGTGCATCAGTGTAG 2874 0.4659 MERSYDVVFVFLLCLFLSQPARSQEDDSQALLALKSSIDALNKLPWREGTDVCTWLGVRDCFNGRVRKLVLEHSNLTGPLDSKILGRLDQLRVLSFKGNSLSGEIPNLSALVNLKSIFLNENNFSGEFPASVAFLHRVKVIVLSQNHISGDIPASLLNLRRLYVLYLQDNAFTGRIPGFNQSSLRYLNVSNNRLSGEIPVSSALIRFNASSFWGNPGLCGEQIEEACKNGSLAPSTSPSYPLIPRTMGKSSTSSLNRTKLIKIIGGSVGGVVLVLVCMAVVWVVICKKKKKKKKKKGGAEVAEGEVGVAGGGGEEEGGFAWENEGVGKLVFCGGGDREMSYSLEELLKASAETLGRGIVGSTYKAVMESGFIVTVKRLKDARYPALEEFRAHIQVLGSLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGMLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLLLELLTGKTPFQDLVQTYGSDIPTWVRSVREEETESGDDPASGNEVSEEKLQALLNIAMACVSLVPENRPTMREILFKAFQGKNTRAYDCDKQKPPSASVVLEREREERKKALPSPQPTRPRSESCYKKGFAFWVTLYFSGISISELNLIWMVVDASCGLRRAISFQPGGGAINRLSEMVPMGNYFGLSSSSEMMIYSGNSSIINSSNPVMGQMSQAGNLSSSSLLLDSVPGLKHDTGLAVEWSVDEQYRLEEGLAKYADEPSIMRYIKIAALLPDKTVRDVALRCRWLTRKRRKSEEHNLGKKVNNRKDKPVELASKTNLHSALPSSMATYPRMSHHMDQSQQIQYDGICSPLKQLMEQNAQAFNQITANLSTYKLQDNIDLFCHTRHNINTILNNMKHSGQSADSIKISNTNLSASV 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00956 957 CDD SANT 780 825 IPR001005 -
Gma11g00956 957 Gene3D Ribonuclease Inhibitor 181 230 IPR032675 -
Gma11g00956 957 SUPERFAMILY Protein kinase-like (PK-like) 352 618 IPR011009 -
Gma11g00956 957 SUPERFAMILY L domain-like 26 220 - -
Gma11g00956 957 Pfam Protein of unknown function (DUF3755) 912 937 IPR022228 -
Gma11g00956 957 Gene3D Ribonuclease Inhibitor 24 180 IPR032675 -
Gma11g00956 957 ProSiteProfiles Leucine-rich repeat profile. 183 205 IPR001611 GO:0005515
Gma11g00956 957 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 26 614 - -
Gma11g00956 957 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 614 - -
Gma11g00956 957 MobiDBLite consensus disorder prediction 636 653 - -
Gma11g00956 957 Gene3D Phosphorylase Kinase; domain 1 335 423 - -
Gma11g00956 957 MobiDBLite consensus disorder prediction 626 661 - -
Gma11g00956 957 Pfam Protein kinase domain 351 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00956 957 Gene3D Transferase(Phosphotransferase) domain 1 424 637 - -
Gma11g00956 957 Pfam Leucine rich repeat N-terminal domain 25 59 IPR013210 -
Gma11g00956 957 Gene3D - 777 839 - -
Gma11g00956 957 ProSiteProfiles Protein kinase domain profile. 348 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00956 Gma-Chr11 8084310 8102197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00956 1 614 Receptor kinase-like Gene Family AT1G60630 60.800 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma11g00956 Pkinase 2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00956 - - gmx:100820186 1114.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00283 12 2261294 2265872 Gma11g00956 11 8084310 8102197 GST