Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00941 ATGCTTCTGGACAAGAATGATACTCAGGAAACCCATTATGAGGTTCTCAATGTAAAGGAAGATGCAAATTATGAAGAAATTCGTGCTAGTTATAGAAGTGCTGTACTCAGCTTACATCCTGATAAGCTATTGAAGACGTCCGAGACATCCAGCAGCAATCAAACAGCGGAAGAGAGATTTCTTAAAGTACAAAAGGCGTGGGAGATTCTGAGTAATTCAAGCTCCCGCTCGTTTTATGATAATGACCTGCGTAGTTCAAGGCAGGATGTCTTGGCTGCTGATGTTGCCGAAGATTTGAGCTTGCAGGATATGATGATTGAAGATGATGGAGAAGCATTGGAACTGTTTTACCAATGCAGATGTGGTGATTACTTCTCTGTAGACTCGTTGGAATTGAAGAATATGGGATATTCCTTATTGAGGGAGGGAAGTGGGATATCTATAATGAATGTTGATACATCACCAGGATCAGTGATTCTTCCTTGTGGATCTTGTTCGTTAAAAGCTCGTTTGCTAATCAATATGGATGTCAATTGA 537 0.4041 MLLDKNDTQETHYEVLNVKEDANYEEIRASYRSAVLSLHPDKLLKTSETSSSNQTAEERFLKVQKAWEILSNSSSRSFYDNDLRSSRQDVLAADVAEDLSLQDMMIEDDGEALELFYQCRCGDYFSVDSLELKNMGYSLLREGSGISIMNVDTSPGSVILPCGSCSLKARLLINMDVN 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00941 178 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 95 174 IPR007872 -
Gma11g00941 178 SUPERFAMILY Chaperone J-domain 8 83 IPR036869 -
Gma11g00941 178 PANTHER DPH3 HOMOLOG-RELATED 1 176 IPR044248 GO:0017183|GO:0046872
Gma11g00941 178 Gene3D DnaJ domain 2 88 IPR036869 -
Gma11g00941 178 SMART dnaj_3 10 75 IPR001623 -
Gma11g00941 178 CDD DnaJ 11 72 IPR001623 -
Gma11g00941 178 SUPERFAMILY CSL zinc finger 96 175 IPR036671 -
Gma11g00941 178 Pfam CSL zinc finger 99 172 IPR007872 -
Gma11g00941 178 Gene3D DPH Zinc finger 89 178 IPR036671 -
Gma11g00941 178 PRINTS DnaJ domain signature 13 31 IPR001623 -
Gma11g00941 178 PRINTS DnaJ domain signature 31 46 IPR001623 -
Gma11g00941 178 PRINTS DnaJ domain signature 55 75 IPR001623 -
Gma11g00941 178 ProSiteProfiles dnaJ domain profile. 11 83 IPR001623 -
Gma11g00941 178 Pfam DnaJ domain 11 80 IPR001623 -
Gma11g00941 178 PANTHER DIPHTHAMIDE BIOSYNTHESIS PROTEIN 4 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00941 Gma-Chr11 7910989 7914468 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00941 12 94 C2H2 Transcription Factor Family AT1G74250 40.964 1.48e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00941 K17867 - gmx:100814856 351.673