Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00936 ATGATGATCGATCAGTCTCTCACCCAAGTTGTTGGAGGCATCAAAGAACTCGCCCAACTTCTTGAAACCGATTTGAAGCATGGCATCGGCGACAACAACAAGGATGACATTGATCACCGAAAACGTGTCTTCGGTGTCAACATGCTCACGAAGCCTCCTTCCAAATGCTTTCTTTCTTTTGTCCTTGAATCTTTTAACGACACCACCATCATCATTCTCTTGGTTTGTTCTTTACTTTCTCTTTTCTTTGGGATCAAGCAACATGGTTGGAAGGAGGGATGGTACGATGGAGGTAGCATCATATTAGCGGTTATTCTTGTCATTGCTGTCTCTTCTGTCAGCAACTTTAACCAATCTAAACAGTTCCAGAAGCTTTCTGCGAAAAGTAACAACATGGGAGGAGTGGAAGTAGTACGAGGTGGTCGGCGACAAAGCATATCAACCTTTGACGTGGTCGTGGGTGACATCGTGTGCTTGAAGGTCGGTGATCAGGTTCCAGCAGATGGGGTTTTTTTGGAGGGACATTCGTTGAAGGTGGATGAATCTAGAATGACGGGGGAGAGTGACCACGTGCATGTGCATGCGAATGGTGAAATTGAAAAAAACCCTTTTTTATTATTATCTGCAGGCACAAAGGTCACCGATGGATTTGCACGCATGCTTGTTACTTCTGTGGGAATGAATACTGCATGGGGTACCATGATGGGTTTCATAACCAATAAAGAGGTTAATAATGAGGAGACACCTTTGCAAGTGCGTCTCAATAAGTTGACTTCTGCTATTGGAAAGGTTGGGTTGTTGGTGGCTGCACTTGTCTTGGTGGTGTCTATGGCACGTTACTTCGCGGGTTGCACGAGAGATGACTTTGGGAACCGTGAATTTGTTCGGGGAAGGACCGAGTCTGATGATGTTGTGAATGCGGTTGTGGCGATTGTTGCCGCGGCGGTGACAATTGTGGTGGTGGCGATCCCTGAAGGGTTGCCGCTTGCTGTTACTCTGAGTCTGGCTTTTTCCATGAAGAAGATGATGAGGGACAATGCCATGGTTAGGAGAATCTCTGCCTGTGAGACGATGGGATCAGCAACAACAATCTGCACTGATAAAACAGGTACACTTACGTTGAATGAGATGAAGGTGACAGAGGTGTGGGTGGGGAAAAGGAAAATAAAAGCGGATCAGGAAGAAGATTTGGCACCGAGTTTAGTCCAATTGCTGAAAGAAGGAATAGGATTGAATACCACTGGAAGCGTTTATTTTCATCCCCACCAAACTTCTTCATCATTGCCTGAAATTTCAGGTAGCCCTACTGAAAAAGCGTTGCTTTCCTGGGCTGTGGAGGATTTGGGGATGGGCGACATCGATGAAGTGAAGCAGCATTGTGAGATAATTCATGTGGAGACATTCAACTCTGAGAAAAAGAGAAGTGGGATTCTGATGAGGGAGAAGAGAGGAAGAAGCAACAGCAGCAACAACAGGGTCCATACACACTGGAAGGGTGCTGCTGAGATGATATTGCGCATGTGCTCAACTTACTACGACCATACAGGGCAAATCATAATCATTGATGATGAAGAGAGGGCTCAAATAGAGAACATTGTCGAGTGCATGGCAACGAAAAGTTTGAGATGCATTGCCTTTGCCCAAAAGAGCTTATTATGCGAAAAACTTGAACTTGAAGAGACAGAACTCACACTGTTGGGGATACTTGGGTTGAAAGACCCTTGTAGGCCAGGAGTTGGAGCAGCAGTTGAATCGTGCAAGAATGCTGGAGTGAAGATTAAGATGATTACAGGAGATAATGCGCACACAGCAAGGGCCATAGCCTCTGAATGTGGGATTCTTGATGATGAATTGGATGATGATCAAGCAGCAGTGGTTGAAGGCTTTCAATTCAGAAATTTCTCACATGAGGAAAGAATGGATAAGATTGATAGAATCAAAGTCATGGCCAGATCATCTCCATCTGACAAGCTTCTGATGGTTCAATGTTTGAAGCAGAAGGgtcatgtggtggcagtcacagGTGATGGCACAAATGACGCACCTGCTCTGAAGGAAGCTGATATTGGACTTTCCATGGGAATACAAGGCACTGACGTGGCAAAGGAGAGCTCAGACATTGTTATCCTTGATGACAATTTCTCTTCTGTGGTCACTGTATTGGAGCGGGGGAGATGTGTGTACGCAAACATTCAAAAGTTCATTCAGTTTCAGCTCACAGTCAATGTTGCTGCACTTGCCATCAACTTTGTAGCTGCAGTTTCTTCTGGTAAAGTGTCTCTTTCAGCTGTCCAGCTTCTGTGGGTAAACCTGGTAATGGATACTCTTGGAGCTTTGGCCTTGGCCACTGAGCAACCAACTAATGATCTCATGAATATGCCACCTGTGGGAAGAGTTGACCCACTTATAACTAGAGTTATGTGGAGGAACCTCATTTCACAAGCAGTGTATCAAGTGCTTGTCTTGCTCACTTTACAATTCGAGGGAAGATCATCAATCTTTGGTGGTGTCAATGAGAAGGTGAAGAACACTATGATTTTCAATGCTTTTGTCCTCTGCCAAGTCTTCAATGAGTTCAACGCAAGGAAGCTGGAGACGAAGAACATATTTGAAGGGCTTGGTAAAAATAAGTTGTTCATGGTAATTGTGGGCCTAACTGTAGTTCTTCAGCTAGTGATGGTTGAGTTTCTCAACAAGTTTGCCAATACTGAGAGATTGACTTGGGAGCAATGGTGTGTGTGTGTTGCCATTGGAGTTTTGTCTTGGCCAATTGGTCTGCTGGTGAAGTGTCTCCCAGTTCGCAACAAGTGTCTCCCAATTGTTACTGACTTAAGTTCATTGCAGCGAGCGTCTTCTTCCGACTCCACTCCGAGGTTTGTTAAGCTGAAGACTAAGAGCGGTTTTGAACTCGCACGCGAGATTATTCATAATTCAACTGAGAAACAGAATTTGCCCCTCTCTCGTGAAGGTAATTACGATGAAGTCAATTCCCAATCTCTTCATGTTTGCCCTGGCTGTGGGGTTTATATGCAAGATTCCAACCCTAAGCACCCTGGTTATTTTATCAAACCCTCTGAGAAGGACTTGAGTTATAGATTGTATAACAATCTTGAACCCGTTGCTCAAGAGCCTGAGTTCTCTAACACTGTTAAAAGGGGAATTGTTATTGAACCAGAAAAGCTTGATGATGATGATGCAAACTTGATTAGGAAACCAGAGAAGCCAGTGGTGTGTGCGCGCTGTCATTCGTTGAGGCACTATGGGAAGGTGAAGGATCCTACCGTGGAAAACTTGCTACCTGATTTTGACTTTGATCACACGGTGGGTAGGAAGTTAGCATCAGCTAGTGGGACCCGGTCTGTGGTGCTGATGGTTGTGGATGTAGTGGATTTTGATGGGTCTTTTCCAAGGAAGGTTGCAAAGTTGGTTTCTAAGACAATTGAGGATCATTCTGCTGCATGGAAGCAGGGTAAGTCAGGGAATGTGCCTAGAGTGGTGCTTGTGGTGACGAAGATTGACTTGTTGCCTAGTTCATTGTCACCAACAAGGTTGGAGCATTGGATTAGGCAGAGAGCAAGAGAGGGTGGAATTAATAAGGTTTCTAGTTTGCACATGGTGAGTGCATTGAGGGATTGGGGGCTGAAGAATCTTGTGGATAATATAGTTGATTTGGCTGGACCTAGAGGGAATGTGTGGGCTGTTGGAGCACAGAATGCAGGAAAGAGTACTTTGATAAACTCTATAGGGAAATATGCTGGAGGGAAGATTACACATCTGACTGAAGCACCTGTGCCAGGGACTACACTAGGCATTGTTAGAGTGGAGGGTGTTTTTTCAAGTCAAGCAAAACTGTTTGATACACCCGGCCTTCTTCATCCTTACCAGATTACAACGAGGTTGATGAGGGAAGAGCAAAAGCTTGTTCATGTGGGCAAGGAATTGAAACCTAGGACTTACAGAATTAAGGCTGGTCATTCAATTCACATAGCTGGTCTAGTGAGATTAGATATTGAAGAAACTCCCTTGGATTCTATTTACGTCACAGTGTGGGCATCTCCTTATCTTCCACTACATATGGGTAAAATAGAAAATGCATGTAAAATGTTCCAAGATCATTTTGGGTGCCAGTTACAGCCACCAATTGGAGAAAAACGAGTACAAGAACTGGGGAATTGGGTGAGAAGGGAATTCCATGTCAGTGGGAACAGTTGGGAGTCAAGTTCAGTAGACATTGCTGTTGCTGGCCTCGGTTGGTTTGCCTTTGGACTTAAAGGAGATGCAGTGTTAGGAGTTTGGACTTATGAAGGAGTTGATGCTGTTCTTCGCAATGCTTTAATACCCTATAGATCAAATACTTTTGAAATTGCAGGGTTTACTGTGTCCAAGATTGTATCCCAGTCTGACCAAGCTTTAAACAAGTCAAAGCAACGAAATGACAAAAAGGCAAAGGGAATTGACTCAAAAGCGCCAACCAGTTTTGTAGAATCACCACTTTTGACTTCTGGTGGAGACATCTAA 4518 0.4416 MMIDQSLTQVVGGIKELAQLLETDLKHGIGDNNKDDIDHRKRVFGVNMLTKPPSKCFLSFVLESFNDTTIIILLVCSLLSLFFGIKQHGWKEGWYDGGSIILAVILVIAVSSVSNFNQSKQFQKLSAKSNNMGGVEVVRGGRRQSISTFDVVVGDIVCLKVGDQVPADGVFLEGHSLKVDESRMTGESDHVHVHANGEIEKNPFLLLSAGTKVTDGFARMLVTSVGMNTAWGTMMGFITNKEVNNEETPLQVRLNKLTSAIGKVGLLVAALVLVVSMARYFAGCTRDDFGNREFVRGRTESDDVVNAVVAIVAAAVTIVVVAIPEGLPLAVTLSLAFSMKKMMRDNAMVRRISACETMGSATTICTDKTGTLTLNEMKVTEVWVGKRKIKADQEEDLAPSLVQLLKEGIGLNTTGSVYFHPHQTSSSLPEISGSPTEKALLSWAVEDLGMGDIDEVKQHCEIIHVETFNSEKKRSGILMREKRGRSNSSNNRVHTHWKGAAEMILRMCSTYYDHTGQIIIIDDEERAQIENIVECMATKSLRCIAFAQKSLLCEKLELEETELTLLGILGLKDPCRPGVGAAVESCKNAGVKIKMITGDNAHTARAIASECGILDDELDDDQAAVVEGFQFRNFSHEERMDKIDRIKVMARSSPSDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTDVAKESSDIVILDDNFSSVVTVLERGRCVYANIQKFIQFQLTVNVAALAINFVAAVSSGKVSLSAVQLLWVNLVMDTLGALALATEQPTNDLMNMPPVGRVDPLITRVMWRNLISQAVYQVLVLLTLQFEGRSSIFGGVNEKVKNTMIFNAFVLCQVFNEFNARKLETKNIFEGLGKNKLFMVIVGLTVVLQLVMVEFLNKFANTERLTWEQWCVCVAIGVLSWPIGLLVKCLPVRNKCLPIVTDLSSLQRASSSDSTPRFVKLKTKSGFELAREIIHNSTEKQNLPLSREGNYDEVNSQSLHVCPGCGVYMQDSNPKHPGYFIKPSEKDLSYRLYNNLEPVAQEPEFSNTVKRGIVIEPEKLDDDDANLIRKPEKPVVCARCHSLRHYGKVKDPTVENLLPDFDFDHTVGRKLASASGTRSVVLMVVDVVDFDGSFPRKVAKLVSKTIEDHSAAWKQGKSGNVPRVVLVVTKIDLLPSSLSPTRLEHWIRQRAREGGINKVSSLHMVSALRDWGLKNLVDNIVDLAGPRGNVWAVGAQNAGKSTLINSIGKYAGGKITHLTEAPVPGTTLGIVRVEGVFSSQAKLFDTPGLLHPYQITTRLMREEQKLVHVGKELKPRTYRIKAGHSIHIAGLVRLDIEETPLDSIYVTVWASPYLPLHMGKIENACKMFQDHFGCQLQPPIGEKRVQELGNWVRREFHVSGNSWESSSVDIAVAGLGWFAFGLKGDAVLGVWTYEGVDAVLRNALIPYRSNTFEIAGFTVSKIVSQSDQALNKSKQRNDKKAKGIDSKAPTSFVESPLLTSGGDI 1505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00936 1505 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 308 395 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma11g00936 1505 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 645 754 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma11g00936 1505 Pfam 50S ribosome-binding GTPase 1231 1301 IPR006073 GO:0005525
Gma11g00936 1505 Pfam E1-E2 ATPase 135 344 - -
Gma11g00936 1505 Pfam Cation transporting ATPase, C-terminus 761 930 IPR006068 -
Gma11g00936 1505 SFLD Haloacid Dehalogenase 347 727 - -
Gma11g00936 1505 PRINTS P-type cation-transporting ATPase superfamily signature 567 578 - -
Gma11g00936 1505 PRINTS P-type cation-transporting ATPase superfamily signature 589 599 - -
Gma11g00936 1505 PRINTS P-type cation-transporting ATPase superfamily signature 180 194 - -
Gma11g00936 1505 PRINTS P-type cation-transporting ATPase superfamily signature 674 693 - -
Gma11g00936 1505 PRINTS P-type cation-transporting ATPase superfamily signature 365 379 - -
Gma11g00936 1505 PRINTS P-type cation-transporting ATPase superfamily signature 698 710 - -
Gma11g00936 1505 Gene3D - 34 241 - -
Gma11g00936 1505 Gene3D - 1109 1294 IPR027417 -
Gma11g00936 1505 Gene3D - 362 719 IPR023214 -
Gma11g00936 1505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1120 1296 IPR027417 -
Gma11g00936 1505 SUPERFAMILY Calcium ATPase, transduction domain A 135 237 IPR008250 -
Gma11g00936 1505 MobiDBLite consensus disorder prediction 1471 1505 - -
Gma11g00936 1505 Gene3D - 375 574 IPR023299 GO:0000166
Gma11g00936 1505 SFLD p-type atpase 347 727 IPR044492 -
Gma11g00936 1505 PRINTS H+-transporting ATPase (proton pump) signature 529 547 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma11g00936 1505 PRINTS H+-transporting ATPase (proton pump) signature 674 690 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma11g00936 1505 PRINTS H+-transporting ATPase (proton pump) signature 706 731 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma11g00936 1505 Pfam haloacid dehalogenase-like hydrolase 362 688 - -
Gma11g00936 1505 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 7 934 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Gma11g00936 1505 ProSitePatterns E1-E2 ATPases phosphorylation site. 367 373 IPR018303 -
Gma11g00936 1505 Gene3D - 63 922 - -
Gma11g00936 1505 SUPERFAMILY HAD-like 363 779 IPR036412 -
Gma11g00936 1505 PANTHER CALCIUM-TRANSPORTING ATPASE 4 988 - -
Gma11g00936 1505 PANTHER CATION TRANSPORTING ATPASE 4 988 - -
Gma11g00936 1505 CDD YqeH 1078 1290 - -
Gma11g00936 1505 SMART Cation_ATPase_N_a_2 6 85 IPR004014 -
Gma11g00936 1505 Pfam Cation transporter/ATPase, N-terminus 13 80 IPR004014 -
Gma11g00936 1505 SUPERFAMILY Calcium ATPase, transmembrane domain M 12 934 IPR023298 -
Gma11g00936 1505 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 371 579 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00936 Gma-Chr11 7845680 7854909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00936 9 933 Primary Pumps ATPases AT3G63380 64.108 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00936 K01537 - gmx:100787728 1745.33