Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00934 ATGTACTTGAGGAGAATACAATGCAGAGATCGGACATGGGCTTTGGTGTTGCAGCCATTGAAATACTTTTTTAGGCCAAGATTCTCTGATCAACgatgttttcaatctttgtcccctaagaccactgtgaaagaatatgcttcacaCGGAAGGATCATCAGAAAACATCTTTTAGGTTTAGATTCATGCAGGCATACTTCATCTAGAAATAGTTTCACCGTTCCGGACAGAAGGCCTAGTTTATGTCTAAACAGTACTCAGTTACGTGCCTATAGTTCTGAAAGTGATGGAAGAAATGCAAGTGAGGATAAGCATGCACATGTTAATGATGGAGCTAATTTTGATAAAGGACGGAAACAAGACAAGTTTGGGAAAGATGTCAAGTACAGCAATTCACATGCTCGACTTGGAGAACAGGAACAAGAGGAATGGCTTAATAATGAGAAGCTTTCTATAGAAAGTAAAAGGAGAGAATCACCATTTTTGACAAGAAGGGATAAGTTTAAAAAAGAGTTTATGAGAAGAATTATTCCTTGGGAGATGATAAACATTTCCTGGGACACATTTCCTTATCACATTCATGAGAATACCAAAAATCTTCTGGTGGAATGTGCTGCTTCCCATTTGAGACATAATAAGCTTGCTTCATCTTTTGGCAGTCGCCTCTCATCTTCAAGTGGGAGAATATTGCTTCAGAGCATTCCTGGAACTGAGCTGTATCGAGAGAGATTGGTTAGGGCTCTTGCACAAGATTTACAAGTTCCTCTGTTAGTGCTTGATAACAGCATTCTTGCTCCTTATGATATTGATGATGATTTATCATCAGATTATGAGTCTGATGAGGATAATGCAGAGTCTGGGGAGGAGGGCTCTTTGGAATCAGAGAATGAGGATGATAATGATGCTACAAATGAAGAAGAGTGGGCTAGCAGTACCGAGGCAAAGTCAGATGCAAGTGATAATGAAGATGCAATAGCGGCTGCTGAGGCACACCTTAAGAAGGTTAAAGCAGCTGTTCTTCGGAAACTTGTTCCTTACAATGTTGAAGAATTAGAAAAGGAAGTGTCTGGTGAATCTGAGAATTCTGAGTCATCCAAGTCTAATGATGTCAAATCTTCTAATGAATCTGGATGCCAGCTAAGAAAAGGTGACCGTGTGAAGTACATTGGGCCATCTGTTAAAGTTACAGATGAGGATAGGATCATACTGGGGAAGATACCTACATTTGATGGTACAACTAATGCTTATACTATTATACATGGCAGGCCTTTAACTAAAGGTCAGAGAGGAGAGGTATATGAGGTTAATGGAGATCGAGTTGCTGTCATCTTGGATATTAATGAAGATAGGGTCAATAAGGGCGAGGTGGAGAATCTTAATGATGATCATACAAAACCCCCAATTTATTGGATACATGTTAAGGACATTGAGAATGATCTTGATGCTCAATCACAGGATTGCTACATAGCAGTGGAGGCTTTATGTGAGGTTTTGCATCACAGACAGCCTCTTATTGTCTATTTTCCGGACAGTTCACAATGGTTACATAAAGCCGTTCCTAAGTCAAACAGAAATGAGTTTTTTCATAAGGTTGAGGAGATGTTTGACCGGTTATCTGGCCCTATAGTATTCATTTGTGGGCAAAACAAAGTTCAGTCAGGATCAAAGGAGAAAGAAGAATTCACAATGATTCTTCCAAACTTTGGACGTGTTGCTAAGCTGCCTCTTTCTCTGAAGCGTTTGACTGAGGGAATTAAAGGGGACAAGACATCAGAAGATGATGAAATTAACAAGCTCTTCTCCAATGTTTTGAGTATGCATCCACCTAAGGATGAGAATCTGCTGGCAACATTTAAGAAACAACTTGAGGAAGATAAGAAAATTGTGACTTCACGTAGTAATTTGAATGTATTACGGAAGGTTCTCGAAGAACATCAGCTATCATGCATGGACCTTTTGCATGTAAATACTGATGGCATCTTTTTGACAAAGCATAAAGCTGAAAAAGTGGTAGGCTGGGCAAAAAATCATTACTTGTCATCATGCTTGCTTCCTTCTGTTAAAGGAGAAAGATTGTGCCTACCTCGTGAAAGTCTTGAAATTGCAGTCTCAAGATTGAAGGGCCAGGAAACTATGTCACGGAAGCCTTCTCAAAGCCTCAAGGCATGTTTTTTTATTTTTTATTATTGTTTTAACCTTGCAAAGGATGAGTTTGAGAGCAATTTCATTTCAGCTGTAGTACCTCCTGGTGAAATTGGGGTGAAGTTTGATGACATAGGTGCTCTTGAAGATGTGAAAAAGGCACTTAATGAACTTGTTATTCTTCCAATGAGAAGGCCAGAGCTTTTCTCTCGTGGGAATCTGTTACGGCCCTGTAAAGGAATATTACTTTTTGGTCCTCCTGGCACTGGGAAAACCCTTCTGGCCAAGGCACTTGCAACCGAAGCTGGTGCAAATTTTATCAGCATAACTGGTTCGACCCTTACTTCAAAGTGGTTTGGAGATGCTGAAAAACTAACCAAAGCGCTTTTCTCATTTGCCAGCAAGCTTGCTCCTGTCATTGTATTTGTCGATGAAGTTGACAGTCTGCTTGGAGCTCGAGGTGGTGCTTTTGAGCATGAGGCCACTAGAAGAATGAGGAACGAGTTCATGGCAGCTTGGGATGGATTGAGGTCAAAAGAAAACCAAAGAATCCTTATTCTGGGTGCAACTAACCGGCCATTTGACCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATGTTGATTTACCAGATGCTGAAAATCGAATGAAGATTTTAAGAATCTTTCTTGCACAAGAAAATTTGAATTCTGATTTTCAGTTTGACAAACTTGCTAACTTGACTGATGGATACTCTGGCAGTGATTTGAAGAACCTCTGTATTGCTGCGGCATATAGACCTGTTCAAGAACTCTTAGAGGAAGAAAAGAAGGGAGCCAGTAATGATACAACTTCGATACTAAGGCCTCTTAATTTGGATGATTTTATTCAGGCAAAATCCAAGGTGGGTCCATCAGTTGCATATGATGCAACAAGCATGAATGAGTTGAGGAAGTGGAACGAAATGTACGGAGAAGGCGGTAGTAGAACAAAAGCGCCGTTTGGATTTGGGACCTGA 3147 0.3959 MYLRRIQCRDRTWALVLQPLKYFFRPRFSDQRCFQSLSPKTTVKEYASHGRIIRKHLLGLDSCRHTSSRNSFTVPDRRPSLCLNSTQLRAYSSESDGRNASEDKHAHVNDGANFDKGRKQDKFGKDVKYSNSHARLGEQEQEEWLNNEKLSIESKRRESPFLTRRDKFKKEFMRRIIPWEMINISWDTFPYHIHENTKNLLVECAASHLRHNKLASSFGSRLSSSSGRILLQSIPGTELYRERLVRALAQDLQVPLLVLDNSILAPYDIDDDLSSDYESDEDNAESGEEGSLESENEDDNDATNEEEWASSTEAKSDASDNEDAIAAAEAHLKKVKAAVLRKLVPYNVEELEKEVSGESENSESSKSNDVKSSNESGCQLRKGDRVKYIGPSVKVTDEDRIILGKIPTFDGTTNAYTIIHGRPLTKGQRGEVYEVNGDRVAVILDINEDRVNKGEVENLNDDHTKPPIYWIHVKDIENDLDAQSQDCYIAVEALCEVLHHRQPLIVYFPDSSQWLHKAVPKSNRNEFFHKVEEMFDRLSGPIVFICGQNKVQSGSKEKEEFTMILPNFGRVAKLPLSLKRLTEGIKGDKTSEDDEINKLFSNVLSMHPPKDENLLATFKKQLEEDKKIVTSRSNLNVLRKVLEEHQLSCMDLLHVNTDGIFLTKHKAEKVVGWAKNHYLSSCLLPSVKGERLCLPRESLEIAVSRLKGQETMSRKPSQSLKACFFIFYYCFNLAKDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIVFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQENLNSDFQFDKLANLTDGYSGSDLKNLCIAAAYRPVQELLEEEKKGASNDTTSILRPLNLDDFIQAKSKVGPSVAYDATSMNELRKWNEMYGEGGSRTKAPFGFGT 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00934 1048 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 754 1017 IPR027417 -
Gma11g00934 1048 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1046 - -
Gma11g00934 1048 MobiDBLite consensus disorder prediction 92 123 - -
Gma11g00934 1048 MobiDBLite consensus disorder prediction 361 377 - -
Gma11g00934 1048 CDD AAA 793 926 - -
Gma11g00934 1048 MobiDBLite consensus disorder prediction 270 321 - -
Gma11g00934 1048 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 1046 - -
Gma11g00934 1048 ProSitePatterns AAA-protein family signature. 898 917 IPR003960 GO:0005524|GO:0016887
Gma11g00934 1048 SMART AAA_5 791 928 IPR003593 -
Gma11g00934 1048 Pfam ATPase family associated with various cellular activities (AAA) 795 925 IPR003959 GO:0005524|GO:0016887
Gma11g00934 1048 Gene3D - 927 1012 - -
Gma11g00934 1048 MobiDBLite consensus disorder prediction 351 379 - -
Gma11g00934 1048 MobiDBLite consensus disorder prediction 96 123 - -
Gma11g00934 1048 Gene3D - 754 1030 IPR027417 -
Gma11g00934 1048 Coils Coil 348 368 - -
Gma11g00934 1048 Pfam AAA+ lid domain 948 983 IPR041569 -
Gma11g00934 1048 MobiDBLite consensus disorder prediction 271 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00934 Gma-Chr11 7807251 7823748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00934 754 986 Calmodulin-binding Proteins AT3G56690 38.559 2.46e-41 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00934 - - gmx:100812718 1889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00258 12 2007533 2027127 Gma11g00934 11 7807251 7823748 GST