Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00933 ATGGGCAAGTCAAGCAAGAAATCAGCTATCAAGGTTGACGCTGCTCCAGCTGTGGTTCCGCCATCCAAGTCTGCCAAGAAGGGAGGCAAGCGACAAGCTCAAGATGAAATTGAGAAGCAAGTGAGTGCCAAAAAACAGAAGATAGAGGAGGTTGCTCAGAAGCAAAAGAAGGAGGCCAAGGTGCAAAAGAAGAAGGAAAGTAGTTCAGATGATTCTTCGGAATCTGAAGAGGAGAAACCTGCACCCAAACCTGTACTTTCAAAAAAGGTACCTGCTAAGAATGGTGCTGCCCTGCCAAAGAAAGACAAGCCAGTCTCCAGTTCTTCTGAAGATGACTCCTCTGACGAGGATGAAGTGAATGCAAAGAAGCCACACAAAGTGGTTGCTGAGAAACAAAAGAATGGAGCAACCGTGCAAAAGAATAAGAAGGAAAGTAGTTCAGATGATTCTTCTTCAGACTCTGAAGATGAGAAACCTGTAGCAAAAGCTGCCGTACCTTCAAAAAAGACACCTGCTAAAAGCAGCAATATAAGTACCCCAGCCAAGAAAGGCAAGCCAGCTAGCAGCTCCAGTTCTTCTGATTCATCTGAAGATGACTCTTCTGATGAGGATGAACTGGCTACAAAAAAGCAAATGAACGAAGTGAAAGTGCAAAAGGGTAAGGAGGAAAGTAGTTCAGATGATTCTTCATCCGATTCTGAAGATGAGAAACCTGCAGCAAAAGTTGCCGTTCCTTCAAAAAATCAATCTGCCAAAAATGGTACTCTAAGTACTCTAGCTAAGAAAGGCAAGCCAGCTGCCAGTTCAAGCTCTTCTGAATCTTCTGATGATAACTCTGATGAGGATGAGGCACCAAAAACCAAGGTGGCCCCTGCTGCAGGCAAAAATGGACATGCTTCTACAAAGAAAACTCAGCCAAGTGAAAGTTCTGACAGTGATAGCTCTGATTCTGATAGCAGCTCTGATGAAGGCAAAAGTAAGAAAAAACCTACAACTGCTAAGCTGCCTACATTGCCAGTTGCTCCAGCGAAGAAAGTGGAAAGCTCAGATGATGAATCAAGTGAAAGCTCTGATGAAGACAATGATGCAAAACCTGCTGTAACTGCTGTATCAAAGCCTTCTGCTCGTGCACAAAAGAAGGTTGAAAGCTCTGATTCTGATGATAGCAGCTCTGATGAAGACAAGGGGAAGATGGATATCGATGATGATGATGATAGTTCTGATGAAAGTGAAGAGCCACAAAAGAAAAAGGCTGTGAAAAATTCAAAAGAAAGCAGTGACAGTTCTGAAGAAGACAGCGAGGATGAAAGTGAAGAGAAACCCTCCAAAACTCCTCAGAAAAGAGGCAGGGACGTGGAGATGGTTGATGCTGCCTTGTCTGAAAAGAAAGCTCCTAAGACCCCAGTTACACCAAGAGAAGAATCTGGCACTTCAAAGACACTATTTGTTGGGAACTTGCCATTTAGTGTTGAGCGGGCTGACGTGGAAGGGTTCTTCAAGGATGCCGGAGAAGTTGTTGATGTTCGTTTTGCTACAGATGATACTGGGAAGTTTAAAGGATTTGGACATGTTGAGTTTGCAACAGCAGAGGCTGCCCAAAATGCTCTTGGGTTGAATGGACAACAATTGTTTAATCGTGAACTCCGGCTTGATTTAGCTCGGGAAAGGGGTGCATATACCCCCAACAGCAGCAACTGGAACAACTCATCCCAGAAAAGTGAAAGAGGCCAGTCTCAAACAATATTTGTAAGGGGTTTCGATACATCCCTTGGGGAAGATGAGATAAGAGGGAGTTTGCAAGAACATTTTGGATCTTGTGGGGACATTACCAGGGTGTCAATTCCTAAAGATTACGAGTCTGGTGCTGTTAAGGGGTTTGCTTATGTGGATTTTGGTGATGCTGATAGCATGGGCAAAGCTCTAGAACTCCATGAAACTGAACTTGGAGGTTATACCTTGACAGTGGATGAAGCCAAACCTAGAGATAATCAGGGTTCTGGGGGTAGAGGTGCtggtggtaggagtggtggtggtggtcgatttggtgctaggggtggtggcggtggtcgatttggtgctaggggtggtggcggtcgatttggtggaagtggtggtggcggtcgatttggtggaagtggtggtggtcgatttggtggaaggggtggtggtggAAGGGGTCGGGGAAATAGACCCAACCTTGCTGCGGAAGGCACAGGGAAAAAGACCAAATTTGCTGATGATGAGTAG 2247 0.413 MGKSSKKSAIKVDAAPAVVPPSKSAKKGGKRQAQDEIEKQVSAKKQKIEEVAQKQKKEAKVQKKKESSSDDSSESEEEKPAPKPVLSKKVPAKNGAALPKKDKPVSSSSEDDSSDEDEVNAKKPHKVVAEKQKNGATVQKNKKESSSDDSSSDSEDEKPVAKAAVPSKKTPAKSSNISTPAKKGKPASSSSSSDSSEDDSSDEDELATKKQMNEVKVQKGKEESSSDDSSSDSEDEKPAAKVAVPSKNQSAKNGTLSTLAKKGKPAASSSSSESSDDNSDEDEAPKTKVAPAAGKNGHASTKKTQPSESSDSDSSDSDSSSDEGKSKKKPTTAKLPTLPVAPAKKVESSDDESSESSDEDNDAKPAVTAVSKPSARAQKKVESSDSDDSSSDEDKGKMDIDDDDDSSDESEEPQKKKAVKNSKESSDSSEEDSEDESEEKPSKTPQKRGRDVEMVDAALSEKKAPKTPVTPREESGTSKTLFVGNLPFSVERADVEGFFKDAGEVVDVRFATDDTGKFKGFGHVEFATAEAAQNALGLNGQQLFNRELRLDLARERGAYTPNSSNWNNSSQKSERGQSQTIFVRGFDTSLGEDEIRGSLQEHFGSCGDITRVSIPKDYESGAVKGFAYVDFGDADSMGKALELHETELGGYTLTVDEAKPRDNQGSGGRGAGGRSGGGGRFGARGGGGGRFGARGGGGRFGGSGGGGRFGGSGGGRFGGRGGGGRGRGNRPNLAAEGTGKKTKFADDE 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00933 748 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 304 683 - -
Gma11g00933 748 PANTHER BNAA08G02930D PROTEIN 304 683 - -
Gma11g00933 748 MobiDBLite consensus disorder prediction 28 84 - -
Gma11g00933 748 SUPERFAMILY RNA-binding domain, RBD 566 691 IPR035979 GO:0003676
Gma11g00933 748 MobiDBLite consensus disorder prediction 246 274 - -
Gma11g00933 748 MobiDBLite consensus disorder prediction 298 314 - -
Gma11g00933 748 CDD RRM2_NUCLs 580 658 IPR034350 -
Gma11g00933 748 MobiDBLite consensus disorder prediction 104 163 - -
Gma11g00933 748 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 479 555 IPR000504 GO:0003723
Gma11g00933 748 SUPERFAMILY RNA-binding domain, RBD 469 570 IPR035979 GO:0003676
Gma11g00933 748 CDD RRM1_NUCLs 480 556 IPR034349 -
Gma11g00933 748 MobiDBLite consensus disorder prediction 203 241 - -
Gma11g00933 748 SMART rrm1_1 480 551 IPR000504 GO:0003723
Gma11g00933 748 SMART rrm1_1 580 656 IPR000504 GO:0003723
Gma11g00933 748 MobiDBLite consensus disorder prediction 438 460 - -
Gma11g00933 748 MobiDBLite consensus disorder prediction 410 427 - -
Gma11g00933 748 Gene3D - 394 561 IPR012677 -
Gma11g00933 748 MobiDBLite consensus disorder prediction 378 396 - -
Gma11g00933 748 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 581 653 IPR000504 GO:0003723
Gma11g00933 748 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 481 549 IPR000504 GO:0003723
Gma11g00933 748 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 579 660 IPR000504 GO:0003723
Gma11g00933 748 Gene3D - 562 699 IPR012677 -
Gma11g00933 748 Coils Coil 30 65 - -
Gma11g00933 748 MobiDBLite consensus disorder prediction 655 748 - -
Gma11g00933 748 MobiDBLite consensus disorder prediction 169 195 - -
Gma11g00933 748 MobiDBLite consensus disorder prediction 1 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00933 Gma-Chr11 7797489 7802878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00933 481 642 Eukaryotic Initiation Factors Gene Family AT4G34110 29.697 2.93e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00933 K11294 - gmx:100786132 1040.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00257 12 1999069 2004673 Gma11g00933 11 7797489 7802878 GST