Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma11g00918 | atggctccgtgttcagtttttttcaattttcttcttctgcttcttctttctttcaccaaagaagctttaggtgtttcagagcaagaagctgacagagtgcatggactacccggacagcctccggtgaagttcaaacaatattctggttatatcactgtcaatgaaacccatggaagagcactcttctattggttctttgaggccactcataaaccagaagaaaagcctcttctcttatggctcaatggagGCCCTGGTTGTTCCTCAATTGGTTATGGAGAAGCAGAGGAGCTAGGACCCTTCTTTCCTCAGGACAGCAGCCAACCAAAGCTAAAGTTAAATCCTTATTCTTGGAATAACGCTGCCAATCTTTTGTTTTTGGAATCCCCTGTTGGGGTGGGGTTCTCCTACACCAACACCAGCAGTGATATAAGTGAGCTTGGTGACACCATTACCGCTAAAGATTCACACACCTTTATCATCAAGTGGTTTAGAAGATTTCCACAATTCAGATCACACGAATTCTACATTTCCGGTGAAAGCTATGCAGGGCACTATGTTCCGCAACTTTCAGAGCTCATTTTCGATAATAATCGCAATCCTGTCGAGAAAGACTACATTAACTTCAAAGGATTCCTGATTGGAAATGCATTACTGGACGACGAAACAGATCAAAAGGGTATGATAGATTATGCATGGGATCATGCTGTGATATCTGATGGAGTATACCATAACATTACAACCATATGCGATTTCAGCCTTCCAATTCTAAATCAAACAAATGAGTGCAATGTGGAACTCAATAAGTACTTCGCTGTGTATAAGATTATTGATATGTATAGCTTGTACACTCCCAGATGTTTCAGCAACACCAGCAGCACCAGAAAGGAAGCCCTTCAAAGTTTTTCAAAAATTGATGGGTGGCACAGAAAATCAGCTGGATATGATCCTTGTGCATCCGATTATACTGAAGCGTACCTAAATAGGCCAGAAGTCCAAAAGGCATTACATGCCAATGTCACCAAAATTCCATATCCATGGACTCATTGCAGTGATAATATCACATTTTGGAATGACTCACCACAGTCCATGCTTCCTGTCATCAAGAAGCTTATTGCCGGTGGTATTCGCATTTGGGTTTACAGTGGAGATACCGATGGAAGAATTCCCGTGACTTCAACAAGATACACTCTTAGAAAGTTGGGGCTTGGGATCGTCGAAGATTGGACTCCCTGGTATACCAGCAAGCAGGTGGGAGGATGGACCATTGCTTACGATGGACTTACTTTTGTTACCATAAGAGGTGCTGGTCATCAAGTTCCTACTTTCACACCCAAGCAAGCTCTGCAGTTGGTTCGACACTTCCTAGCAAATAAGAAATTATCATCTCAACCAATTTAA | 1401 | 0.3462 | MAPCSVFFNFLLLLLLSFTKEALGVSEQEADRVHGLPGQPPVKFKQYSGYITVNETHGRALFYWFFEATHKPEEKPLLLWLNGGPGCSSIGYGEAEELGPFFPQDSSQPKLKLNPYSWNNAANLLFLESPVGVGFSYTNTSSDISELGDTITAKDSHTFIIKWFRRFPQFRSHEFYISGESYAGHYVPQLSELIFDNNRNPVEKDYINFKGFLIGNALLDDETDQKGMIDYAWDHAVISDGVYHNITTICDFSLPILNQTNECNVELNKYFAVYKIIDMYSLYTPRCFSNTSSTRKEALQSFSKIDGWHRKSAGYDPCASDYTEAYLNRPEVQKALHANVTKIPYPWTHCSDNITFWNDSPQSMLPVIKKLIAGGIRIWVYSGDTDGRIPVTSTRYTLRKLGLGIVEDWTPWYTSKQVGGWTIAYDGLTFVTIRGAGHQVPTFTPKQALQLVRHFLANKKLSSQPI | 466 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma11g00918 | 466 | ProSitePatterns | Serine carboxypeptidases, serine active site. | 177 | 184 | IPR018202 | GO:0004185 | |
Gma11g00918 | 466 | Gene3D | - | 364 | 457 | - | - | |
Gma11g00918 | 466 | SUPERFAMILY | alpha/beta-Hydrolases | 28 | 461 | IPR029058 | - | |
Gma11g00918 | 466 | Gene3D | alpha/beta hydrolase | 27 | 289 | IPR029058 | - | |
Gma11g00918 | 466 | Pfam | Serine carboxypeptidase | 37 | 458 | IPR001563 | GO:0004185|GO:0006508 | |
Gma11g00918 | 466 | ProSitePatterns | Serine carboxypeptidases, histidine active site. | 428 | 445 | IPR033124 | GO:0004185 | |
Gma11g00918 | 466 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 21 | 465 | IPR001563 | GO:0004185|GO:0006508 | |
Gma11g00918 | 466 | Gene3D | - | 318 | 355 | - | - | |
Gma11g00918 | 466 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 114 | 126 | IPR001563 | GO:0004185|GO:0006508 | |
Gma11g00918 | 466 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 127 | 137 | IPR001563 | GO:0004185|GO:0006508 | |
Gma11g00918 | 466 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 163 | 188 | IPR001563 | GO:0004185|GO:0006508 | |
Gma11g00918 | 466 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 428 | 441 | IPR001563 | GO:0004185|GO:0006508 | |
Gma11g00918 | 466 | PANTHER | CARBOXYPEPTIDASE | 21 | 465 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma11g00918 | Gma-Chr11 | 7682005 | 7690118 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma11g00918 | 326 | 461 | Calmodulin-binding Proteins | AT2G22960 | 29.197 | 4.99e-15 | 71.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma11g00918 | K16297 | - | gmx:100781503 | 957.207 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma12g00242 | 12 | 1872274 | 1876078 | Gma11g00918 | 11 | 7682005 | 7690118 | GST |