LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma11g00899	ATGTGGAAAGCAGCACTAACAGAATTAACAGCCACTGCCTCTCTAATGTTCACCTTGACAACTTCCATCATTGCATGCTTGGACTCACATGAGATCGATCCTAAGCTTCTTGTTCCCTTTGCAGTCTTCACAATAGCCTTTTTGTTCCTAATTGTGACGGTTCCTCTCACGGGAGGCCACATGAGTCCTGTTTTCACATTCATTGCTGCTTTAAAGGGTGTTGTGACTCTCACCCGTGCCCTCATTTACGTGCTAGCACAATGCATTGGTTCAATAATTGGTTTCTTTATACTAAAATGTGTCATGGACCCAAAATTAGCTTACACATATTCCTTGGGAGGTTGTGCCATCAGTGGCCAAGGAGTGATCAATTCTTCTTCTGGTGGTATTAAGCCACTAGATGCTTTGTTAGTGGAATTCACTTGCACATTTGTGGTACTCTTTGTGGGGGTAACATTGGCATTTGATAAGAAAAGGTCAAGGGATTTGGGCTTGCCAATGGTGTGCTTGGTGGTGGCAGGAGCTATGGCATTGGCGGTATTTGTGTCCATAACTGTAACTGGGCGGGCCGGTTATGCGGGTGTGGGCTTGAACCCTGCAAGATGCTTAGGCCCAGCGTTGCTTCATGGAGGGTTACTCTGGGAAGGGCATTGGGTTTTCTGGCTTGGGCCCTTCTTGGCATGTGTAGTCTATTATGCTGTGTCTATTAACCTACCAAGGGAGGGTTTGGTTTGGGTGGATGGAGAATATGATGTGTTGAAATTGGCTCTCGGTTCTTGTGGGAATGTCCATAATACTTCCGTTTCAAAGGATCATCAACTAGAAGAACCAAGTGCAGGGTTCCAAGTCTAA	852	0.4577	MWKAALTELTATASLMFTLTTSIIACLDSHEIDPKLLVPFAVFTIAFLFLIVTVPLTGGHMSPVFTFIAALKGVVTLTRALIYVLAQCIGSIIGFFILKCVMDPKLAYTYSLGGCAISGQGVINSSSGGIKPLDALLVEFTCTFVVLFVGVTLAFDKKRSRDLGLPMVCLVVAGAMALAVFVSITVTGRAGYAGVGLNPARCLGPALLHGGLLWEGHWVFWLGPFLACVVYYAVSINLPREGLVWVDGEYDVLKLALGSCGNVHNTSVSKDHQLEEPSAGFQV	283

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma11g00899	283	PANTHER	AQUAPORIN-LIKE	1	269	-	-
	Gma11g00899	283	Gene3D	Glycerol uptake facilitator protein.	1	238	IPR023271	-
	Gma11g00899	283	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	26	-	-
	Gma11g00899	283	PANTHER	MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER	1	269	-	-
	Gma11g00899	283	SUPERFAMILY	Aquaporin-like	2	231	IPR023271	-
	Gma11g00899	283	PRINTS	Major intrinsic protein family signature	3	22	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gma11g00899	283	PRINTS	Major intrinsic protein family signature	42	66	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gma11g00899	283	PRINTS	Major intrinsic protein family signature	79	98	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gma11g00899	283	PRINTS	Major intrinsic protein family signature	138	156	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gma11g00899	283	PRINTS	Major intrinsic protein family signature	179	201	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gma11g00899	283	PRINTS	Major intrinsic protein family signature	218	238	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Gma11g00899	283	Pfam	Major intrinsic protein	2	227	IPR000425	GO:0015267\|GO:0016020\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma11g00899	Gma-Chr11	7567815	7568666	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma11g00899	2	230	Major Intrinsic Protein MIP	AT3G61430	29.412	9.48e-23	93.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma11g00899	K09866		-	gmx:100804160	559.296

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma12g00225	12	1762618	1763277	Gma11g00899	11	7567815	7568666	GST