Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00898 ATGGTAGAGTTAATTGCAACTGCTGCACTAATGCTCACCCTAACGAGTTGCAATATGCATGTTTGGAGTCACACAATGTCAATCCCAAGCTTCTTATTCCCTTTTGCAGTCTTCATCATAGTATTCTTGTTTCTAATTGTGATAGTTCCTCTATCCGGGGGTCATATGAACCCTATTTTCACATTCATTGCGGCTTTAAAGGGTGTTGTGACCCTTTCTCGTGCTCTCCTTTACGTGTCAGCACAATGCATTGGCTCAATAATTGGTTTCTTTGTGCTCAAGAGTGTGATGGAGCCAAAATTAGCAGACACATATTCTTTGGGAGGTTGTGCCCTTGGTGATCTCAAAGGAAAAATTCCTGGCATAAAGCCACAAGATGCTTTGTTGTTGGAATTCTCTTGCACATTCTTAGTACTCTTTTTGGGTCTAACGTTGGCTTTTGATAAGAAAAGGTGCAAGGAATTGGGCTTGCCAATGGTTTGTTTGGTGGTAGCAGCATCCTTGGCACTGGCAGTGTTTGTGTCCATAACTGTAACTGGGAGGCCTGGCTATGCAGGTGCTGGGCTTAGCCCGGCAAGATGCCTAGGCCCAGCGTTGCTTCTTGGAGGCCCACTATGGAATGGGCATTGGGTTTTCTGGCTTGGACCTTTCTTGGCCTGCATAATCTATTATAGTGTCTCCATTAATCTACCAAAGAAGGATTTGGATGGGGTAGATGGAGAATATGATGTCTTAAAATTGGCTCTGGGTTCTTGTGGGACTATCTCTAACAATGTTGTTATCAATGATCTTCCTTGA 798 0.4373 MVELIATAALMLTLTSCNMHVWSHTMSIPSFLFPFAVFIIVFLFLIVIVPLSGGHMNPIFTFIAALKGVVTLSRALLYVSAQCIGSIIGFFVLKSVMEPKLADTYSLGGCALGDLKGKIPGIKPQDALLLEFSCTFLVLFLGLTLAFDKKRCKELGLPMVCLVVAASLALAVFVSITVTGRPGYAGAGLSPARCLGPALLLGGPLWNGHWVFWLGPFLACIIYYSVSINLPKKDLDGVDGEYDVLKLALGSCGTISNNVVINDLP 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00898 265 PRINTS Major intrinsic protein family signature 37 61 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma11g00898 265 PRINTS Major intrinsic protein family signature 74 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma11g00898 265 PRINTS Major intrinsic protein family signature 130 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma11g00898 265 PRINTS Major intrinsic protein family signature 171 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma11g00898 265 PRINTS Major intrinsic protein family signature 210 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma11g00898 265 Pfam Major intrinsic protein 49 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gma11g00898 265 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 259 - -
Gma11g00898 265 PANTHER AQUAPORIN-LIKE 1 259 - -
Gma11g00898 265 SUPERFAMILY Aquaporin-like 2 222 IPR023271 -
Gma11g00898 265 Gene3D Glycerol uptake facilitator protein. 1 234 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00898 Gma-Chr11 7564848 7565645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00898 40 222 Major Intrinsic Protein MIP AT2G37170 29.189 1.83e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00898 K09866 - gmx:100797262 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00224 12 1760160 1761653 Gma11g00898 11 7564848 7565645 GST