Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00887 ATGCTTCAAAGCTTGGTCCCCCGATCCCCTCGCACTTCAAACCCCAACGCTATGAAAACTAAGCGCGCCGTTGACGCCGGAGGCGATTCCCCCGCCGACGAACCTTCCTTCAAGCGGACCAACTTCTCCGGCGAGAAAACTACGGCCGAAGCTGAGGAGGAGCAAGCCTTCGATCCCGAGCCTCACGGCGGCGATTCCACCGGTCTCAAACTCCTCGGTCTGCTCCTCCAATGCGCGGAGTGCGTCGCCATGGACAACCTCGACTTCGCCAACGACCTCCTCCCGGAGATCGCGGAACTCTCTTCGCCGTACGGGACCTCGCCGGAGCGCGTCGGTGCGTACTTCGCCCAGGCGCTGCAGGCGCGCGTGGTGAGCTCCTGCATCGGCTCCTACTCTCCGCTGACCGCGAAATCGGTAACCCTAACTCAGTCGCAGAAAATCTTCAACGCGTTCCAATCCTACAACTCGGTGTCGCCACTGGTGAAGTTCTCGCACTTCACCGCGAACCAGGCGATCTTCCAGGCCTTAGACGGCGAGGATCGAGTCCACATCATCGACCTCGACATCATGCAAGGCCTCCAATGGCCAGGATTGTTTCACATCCTCGCCTCTCGCTCCAAAAAAATCCGCTCCGTGAGAATCACCGGATTCGGATCCTCCTCGGAGCTCCTCGACTCCACCGGCCGGAGACTCGCCGATTTTGCGAGCTCGCTCGGTCTTCCCTTCGAGTTCTTCCCCGTGGAAGGCAAAATCGGAAGCGTGACGGAACTGAGTCAACTCGGCGTTCGACCTAACGAGGCAATCGTGGTGCACTGGATGCACCACTGCTTATACGACATAACGGGGAGCGATTTAGGGACGTTGAGATTGCTGACTCAACTTCGGCCGAAACTGATAACGACCGTTGAGCAGGATCTAAGCCACGCAGGGAGCTTCCTGGCGCGGTTCGTGGAGGCCTTGCATTATTACAGCGCGTTGTTCGACGCGCTAGGGGATGGTTTGGGTGCGGACAGCCTGGAGAGGCACACGGTGGAGCAGCATCTGTTGGGCTGCGAGATCAGGAACATCGTGGCCGTGGGCGGGCCCAAGAGGACCGGCGAGGTTAAGTTGGAGAGGTGGGGGGATGAGTTGAAACGGGCCGGGTTTGGGCCCGTTTCGCTCAGGGGCAACCCGGCTGCACAAGCGAGCTTGTTGCTGGGAATGTTCCCTTGGAGAGGGTATACACTGGTCGAAGAGAATGGTTCCCTCAAGCTTGGTTGGAAGGATTTGTCTCTGTTGATCGCCTCCGCTTGGCAACCGTCAGATTTGATGATTACTTATCCTGATTGA 1329 0.5862 MLQSLVPRSPRTSNPNAMKTKRAVDAGGDSPADEPSFKRTNFSGEKTTAEAEEEQAFDPEPHGGDSTGLKLLGLLLQCAECVAMDNLDFANDLLPEIAELSSPYGTSPERVGAYFAQALQARVVSSCIGSYSPLTAKSVTLTQSQKIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDRVHIIDLDIMQGLQWPGLFHILASRSKKIRSVRITGFGSSSELLDSTGRRLADFASSLGLPFEFFPVEGKIGSVTELSQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLTQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGADSLERHTVEQHLLGCEIRNIVAVGGPKRTGEVKLERWGDELKRAGFGPVSLRGNPAAQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLIASAWQPSDLMITYPD 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00887 442 MobiDBLite consensus disorder prediction 1 19 - -
Gma11g00887 442 ProSiteProfiles GRAS family profile. 62 432 IPR005202 -
Gma11g00887 442 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 433 IPR005202 -
Gma11g00887 442 MobiDBLite consensus disorder prediction 1 63 - -
Gma11g00887 442 Pfam GRAS domain family 73 432 IPR005202 -
Gma11g00887 442 PANTHER SCARECROW-LIKE PROTEIN 23 41 433 - -
Gma11g00887 442 MobiDBLite consensus disorder prediction 45 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00887 Gma-Chr11 7473466 7475356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00887 66 435 GRAS Transcription Factor Family AT5G41920 70.667 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g00887 GRAS 1.4e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00887 - - gmx:100816249 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00213 12 1679213 1679734 Gma11g00887 11 7473466 7475356 GST