Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00882 ATGATGTCACTTTCACCTAGCTTAGGTTCTCCCAACAATCTCTTGTTTAGGGAAATGAAATCCGAGGAAAGGGGTTTGTACTTGATCCATTTGTTGCTCACTTGTGCAAACCATGTAGCTGCTGGTAACCTTGAAAATGCAAACACCACACTTGAGCAAATTTCCCTGCTTGCTTCCCCTGATGGGGACACTATGCAGCGAATCGCGACATATTTTATGGAATCGCTTGCTGATCGGATTCTTAAAACATGGCCTGGGATCCACAGAGCCCTCAACTCGACCAGAATTACTTTGCTATCCGACGAAATTCTGGTTCAGAAGCTTTTCTTTGAGCTTTTCCCTTTCTTGAAGGTAGCATTTGTTCTCACAAATCAGGCCATCATTGAAGCAATGGAAGGGGAGAAAGTGATTCACATAATTGATCTCAATGCTGCTGAAGCTGCTCAGTGGATTGCTCTCCTTCAAGTATTGAGTGGGCGTCCCGAAGGCCCTCCTCATTTGAGGATCACCGGGGTTCATCAGAAAAAGGAGATTCTGGATCAGGTGGCTCATAGACTAACTGAAGAAGCAGAAAAGTTGGATATACCGTTCCAATTCAACCCTGTGGTGAGCAAATTAGAAAATCTTGATTTCGACAAACTTCGCGTGAAGACTGGCGAGGCACTAGCAATAAGTTCCATTCTCCAATTGCATACCCTTTTGGCCTGGGATGATGAAACCATGCAGAGAAAGTCTCCTCTTCTGTTGAAAACCTCAAATGGAATTCACTTGCAAAGAGTCCTGCCAATGGGCCAAAGCACATTGGGTGATTTGGTTGAGAAAGATATGGTTAATGGGTACACTCTAAGTCCTGACTCAACCTCATCTTCACCGGCATCTTTAACTACTTCCAATTCAATGAATATGGAGAGCTTTCTTAATGCCTTGTGGGGATTATCACCAAAGGTCATGGTTGTGACAGAACAAGACTGTAATCACAATGGTCCAACTCTGATGGATAGGCTACTTGAAGCTCTATATTCTTTTGCAGCATTGTTTGATTGTTTGGAATCCACTGTCTCAAGAACATCATTGGAGAGATTAAGGGTGGAGAAGATGCTTTTTGGGGAGGAAATCAAGAACATCATTGCATGTGAGGGATCTGAACGAAAGGAGAGACATGAAAAGCTGGAAAAGTGGTTCCAGAGATTTGATCTAGCTGGGTTTGGTAACGTGCCTTTGAGCTACTTTGGTATGTTGCAAGCAAGGAGGTTCCTGCAAAGCTATGGTTGTGAAGGATACAGAATGAGGGATGAAAATGGTTGTGTCTTAATTTGCTGGGAGGATCGGCCAATGTATTCAATATCAGCTTGGAGATCTAGGAAAGATACTCTATTCATTGCCTGGTAA 1389 0.4334 MMSLSPSLGSPNNLLFREMKSEERGLYLIHLLLTCANHVAAGNLENANTTLEQISLLASPDGDTMQRIATYFMESLADRILKTWPGIHRALNSTRITLLSDEILVQKLFFELFPFLKVAFVLTNQAIIEAMEGEKVIHIIDLNAAEAAQWIALLQVLSGRPEGPPHLRITGVHQKKEILDQVAHRLTEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSILQLHTLLAWDDETMQRKSPLLLKTSNGIHLQRVLPMGQSTLGDLVEKDMVNGYTLSPDSTSSSPASLTTSNSMNMESFLNALWGLSPKVMVVTEQDCNHNGPTLMDRLLEALYSFAALFDCLESTVSRTSLERLRVEKMLFGEEIKNIIACEGSERKERHEKLEKWFQRFDLAGFGNVPLSYFGMLQARRFLQSYGCEGYRMRDENGCVLICWEDRPMYSISAWRSRKDTLFIAW 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00882 462 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 454 IPR005202 -
Gma11g00882 462 ProSiteProfiles GRAS family profile. 19 452 IPR005202 -
Gma11g00882 462 PANTHER SCARECROW-LIKE PROTEIN 3 1 454 IPR030008 GO:0003700|GO:0005634|GO:0009739
Gma11g00882 462 Pfam GRAS domain family 28 452 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00882 Gma-Chr11 7413764 7415264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00882 16 455 GRAS Transcription Factor Family AT1G50420 66.140 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g00882 GRAS 2.7e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00882 - - gmx:100814131 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00882 11 7413764 7415264 Gma11g00882 11 7413764 7415264 ECH
Gma12g00207 12 1626657 1629165 Gma11g00882 11 7413764 7415264 GST