Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00841 ATGCGGGATCACGTTGTCGTTCTAGGTTCCCTAGCTTGGATCTTGGCTCTCTACTCCTCGCTTCAACGAGGAGAAGAGGGAATGGCGGCTTACATGTGtgcagacagtggcaacctcatggcgattgcgcagcaaTCCCCCGTGGACTCCGACTCCGACTCCTCCGTACATCCCCTCCTCAAAGCCCTGGCCGAGTGCGCCTCCCTGGCCGAAACGGAGCCGGATCAGGCCGCGGAATCCCTAAGCCGTTTGCGAAAATCCGTTTCCCAGCACGGAAACCCCACTCAGCGAGTGGGCTTTTACTTCTGGCAGGCCCTCTCCCGCAGAGAAGAAAAGGGCCATAATAGCACTTGGGATGAGGAGTTAACACTCTCTTACAAAGCCCTGAACGACGCCTGCCCTTACTCCAAGTTCGCTCACTTAACCGCCAACCAAGCCATCCTTGAAGCCACCCAAACCGCCTCCAACATCCACATCGTCGACTTCGGTATCGTCCAAGGGATTCAATGGGCCGCACTCTTGCAAGCTTTCGCCACTCGTCCTTCTGGAAAGCCCAATAAGATCAGAATCTCCGGCATCCCCGCCCTCTCCCTTGGTTCCTCTCCCGGCCCCTCTCTCTCCGCCACCGCCCACCGCCTCTCCGACTTCGCCAAGCTTCTCGACTTGAACTTCCACTTCACTCCTATTCTCACTCCCATTCACCAACTCGACCGCAACAGCTTCTGCATTGACGACACTAACGAAGCCTTGGCTGTTAACTTCATGCTCCAGTTGTATAACCTCCTCGACGAGCCTCCCACCGCTGTTGACACTGCGCTCAGGTTGGCCAAGTCTTTGAACCCCAAAATTGTCACCCTTGGCGAGTACGAAGCAAGCGTCACACGTTTCGGCTTTGTCAACCGCTTCAAGACTGCGTTTAAGTACTTCTCTGCTGTGTTTGAGTCTCTGGAGCCTAATTTGGCCGCGGACTCGCCGGAGAGGTTTCAGGTGGAGAGTCTTCTTCTCGGGCGGCGAATCGCGGCGGTCATTGGGGGGCCCGGGTCGGTGAGGAGGGAGAGTATGGAGGACAAAGAGCAGTGGAGGGTTCTGATGGAGCGTGCTGGTTTTGAATCAGTGAGTCTAAGCCATTATGCAATTAGTCAAGCTAAGATACTTCTCTGGAATTACAGTTACAGTTCTCTGTTTTCGCTGGTGGAATCTACACCACCGGGGTTTTTGTCTCTGGCTTGGAAGGATGTTCCTCTCTTGACCGTCTCCTCTTGGCGTTAG 1269 0.5343 MRDHVVVLGSLAWILALYSSLQRGEEGMAAYMCADSGNLMAIAQQSPVDSDSDSSVHPLLKALAECASLAETEPDQAAESLSRLRKSVSQHGNPTQRVGFYFWQALSRREEKGHNSTWDEELTLSYKALNDACPYSKFAHLTANQAILEATQTASNIHIVDFGIVQGIQWAALLQAFATRPSGKPNKIRISGIPALSLGSSPGPSLSATAHRLSDFAKLLDLNFHFTPILTPIHQLDRNSFCIDDTNEALAVNFMLQLYNLLDEPPTAVDTALRLAKSLNPKIVTLGEYEASVTRFGFVNRFKTAFKYFSAVFESLEPNLAADSPERFQVESLLLGRRIAAVIGGPGSVRRESMEDKEQWRVLMERAGFESVSLSHYAISQAKILLWNYSYSSLFSLVESTPPGFLSLAWKDVPLLTVSSWR 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00841 422 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 60 421 - -
Gma11g00841 422 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 60 421 IPR005202 -
Gma11g00841 422 Pfam GRAS domain family 60 422 IPR005202 -
Gma11g00841 422 ProSiteProfiles GRAS family profile. 50 422 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00841 Gma-Chr11 7080731 7084087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00841 58 422 GRAS Transcription Factor Family AT5G66770 66.577 6.06e-172 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g00841 GRAS 2.7e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00841 - - gmx:100792494 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00169 12 1281574 1283019 Gma11g00841 11 7080731 7084087 GST