Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00837 ATGTCAGAAGCAGCAGCTACTTCTTTTGAAACTCAACACAGCTCTACAGAATCGTGTGTACCTAAAACAACAACTACTACTTCTTCTGATGTATCATCATCACCCCAAACTACCCACATTTTCAAATCTAAATTACCAGACATACCCCTCCCCAACAACCTCCCCCTCCACAAATACTGCTTCCTTAAACTCCCCGAAATCGCCGACCGGCCATGCCTCATCGCCGGCAGCAGAAAATACACCTACGGCGAAACTCACGTGACATCGCGAAGGGTGGCCGCCGGCATGTCGAAGCTGGGCATCCAGAAGGGAGACGTCATCATGATTCTCCTCCCGAACTCCCCGGAGTTCGTGTTCTTCTTCATGGCGTCCTCCATGCTCGGCGCCGTGGCCACCACCGCCAATCCCTTCTATACCGCCGCCGAAATCACGAAGCAACTCGCCGCCTCCAAGGCCAAGCTTGTAGTCACCCTCTCCGCCCACGTCCACAAGCTCGACCAACAACAGGGTTTGAAGGTGGTCACCGTGGACGAGCCGGCGGCGGATGAGAACTGCATGAGTTTCCGGGAAGGCGAGGAGAGCGAGGTGGCGGAGGTGGAGATATCGGCGGAGGACGCGGTGGCGCTGCCGTTCTCGTCGGGGACTACGGGGCTGGCGAAGGGGGTGGTTCTGACGCACAAGAGCCTGGTGACGGGCGTGGCGCAGAACATGGAGGGAGAGAACCCGAACGTGTACCTGAAGGAAGAGGACGTTGTGCTGTGCGTGCTTCCCTTGTTTCACATATTCTCCATGCACAGTGTCATGATGTGCGCGCTCAGAGCGGGGAGTGCCATTTTGTTGATCGAAAAGTTTGAGATAAGGGCGCTGCTGGAGGAGATTGAGAGGCACAGGGTCACCGTGGCGATGGTGGTGCCGCCTCTCGTGGTGGCGCTGGCGAAGAACCCCGCGGTGGAGGAGTATGATTTGAGCTCCATACGGTTGGTCATGTCCGGGGCTGCGCCGCTGGGGCACCAGTTGGAAGAGGTTCTACGGAATAGGTTGCCCAACGCAATTCTGGGACAGGGATACGGGATGACAGAGGCTGGACCGGTGTTGGCGATGTGTTTAGGGTTTGCAAAGTATCCATTCCCGACAAAGACAGGCTCTTGCGGAACAGTAGTCAGAAATGCTGAGTTGAAGGTCATTCACCCTCTTACTGCCCTTTCTCTTCCCCCTAACCACCCTGGCGAAATTTGCATCCGTGGCCAACAGATCATGAAAGGTTACCTGAATGACGAGAAGGCTACTGCAGCAACTATTGACGTAGATGGTTGGCTTCATACAGGCGATATTGGCTATGTCGATGATGATGATGAGATTTTCCTGATTGACAGGGCCAAGGAGCTCATCAAATTTAAAGGCTTCCAGGTGCCACCAGCAGAACTTGAAGACCTTCTTATGAGCCACCCTTCCATTGCAGATGCGGCCGTTGTCCCGCAAAACGACGATGCTGCAGGTGAAGTTCCAGTGGCTTTCGTGGTGGGCTTTGATCTTACAGAAGAGGCAGTCAAGGATTTTATAGCGAAACAGGTAGTGTTTTACAAAAGACTACACAAAGTGTATTTTGTTCCTGCAATTCCAAAGTCTCCAACCGGAAAGATATTAAGAAAAGAACTCAGAGCAAAGCTCGCGAGCATTATTATTCAGAGGACCTAG 1695 0.5339 MSEAAATSFETQHSSTESCVPKTTTTTSSDVSSSPQTTHIFKSKLPDIPLPNNLPLHKYCFLKLPEIADRPCLIAGSRKYTYGETHVTSRRVAAGMSKLGIQKGDVIMILLPNSPEFVFFFMASSMLGAVATTANPFYTAAEITKQLAASKAKLVVTLSAHVHKLDQQQGLKVVTVDEPAADENCMSFREGEESEVAEVEISAEDAVALPFSSGTTGLAKGVVLTHKSLVTGVAQNMEGENPNVYLKEEDVVLCVLPLFHIFSMHSVMMCALRAGSAILLIEKFEIRALLEEIERHRVTVAMVVPPLVVALAKNPAVEEYDLSSIRLVMSGAAPLGHQLEEVLRNRLPNAILGQGYGMTEAGPVLAMCLGFAKYPFPTKTGSCGTVVRNAELKVIHPLTALSLPPNHPGEICIRGQQIMKGYLNDEKATAATIDVDGWLHTGDIGYVDDDDEIFLIDRAKELIKFKGFQVPPAELEDLLMSHPSIADAAVVPQNDDAAGEVPVAFVVGFDLTEEAVKDFIAKQVVFYKRLHKVYFVPAIPKSPTGKILRKELRAKLASIIIQRT 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00837 564 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 39 555 - -
Gma11g00837 564 PANTHER 4-COUMARATE--COA LIGASE 3 39 555 - -
Gma11g00837 564 MobiDBLite consensus disorder prediction 1 36 - -
Gma11g00837 564 Pfam AMP-binding enzyme 69 465 IPR000873 -
Gma11g00837 564 CDD 4CL 50 552 - -
Gma11g00837 564 Pfam AMP-binding enzyme C-terminal domain 474 546 IPR025110 -
Gma11g00837 564 Gene3D - 459 559 IPR045851 -
Gma11g00837 564 SUPERFAMILY Acetyl-CoA synthetase-like 40 559 - -
Gma11g00837 564 ProSitePatterns Putative AMP-binding domain signature. 209 220 IPR020845 -
Gma11g00837 564 Gene3D - 32 458 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00837 Gma-Chr11 7037039 7040620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00837 21 472 Monolignol Biosynthesis Gene Families AT1G65060 65.727 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00837 K01904 - gmx:100790396 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02325 01 58227478 58232020 Gma11g00837 11 7037039 7040620 GST