Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00825 ATGCCCCAGAACTGCATAGCACCAAAACCAGAATACTGCAATAGTACTCATCACTCTGTGGAAGAACCACCAGAGATGACCGAGCCACATGACTCAACTGTTATTTCCTATCCCATGCAAACCAATGAACAACAACAACAACCGTTCCCAAAACTCATTATGTACCCCATAACTCTGAAGTTTGAAGAGTTGGTGTACAAAGTTAAACTAGAGCAGAAAGGAGGGTGCTGGGGAAGTACATGGACTTGCAAGGAGAAGACCATACTGAATGGAATCACTGGTGTGGTGTGTCCAGGAGAAATACTAGCCATGTTGGGGCCATCAGGCAGTGGCAAAACCACACTTCTTACAGCACTCGGAGGCCGGCTCAGTGGAAAACTATCCGGTAAGATCACGTACAACGGCCAGCCTTTCTCAGGTGCCATGAAGAGAAGAACAGGCTTTGTGGCTCAGGATGATGTACTATACCCTCACCTAACCGTCACCGAAACACTAGTGTTCACTGCACTCCTAAGGCTTCCAAACAGCTTGTGCCGAGACGAAAAGGTTCAGCATGTTGAGAGAGTGATCACTGAGCTAGGACTGACTCGTTGCAGGAGCAGCATGATAGGAGGACCACTTTTTAGAGGAATATCAGGTGGAGAGAAAAAGAGAGTGAGCATAGGCCAAGAAATGCTCATCAACCCAAGCCTCTTGCTGCTGGATGAGCCTACTTCTGGCTTGGATTCCACCACAGCACAAAGGATCCTCAACACGATCAAACACCTCGCCAGCGGTGGCAGAACTGTTGTCACAACCATTCACCAACCCTCTAGTAGGCTCTACTACATGTTTGATAAGGTGGTGTTGCTCTCTGAAGGCTGCCCCATCTATTATGGTCCTGCTTCAACTGCCTTGGACTACTTCTCATCAGTTGGATTTTCCACATGTGTGACTGTCAATCCAGCTGATCTCTTGCTTGATCTTGCCAACGGGATTGCCCCGGACTCCAAGCATGCAACTGAACAAAGTGAGGGACTAGAACAGGAGAGAAAGCAGGTGAGAGAATCTCTCATCTCTGCTTATGAGAAGAATATAGCTACAAGGCTGAAATCTGAGGTTTGCAGTCTGGAAGCTAACAACTACAATATCACAAAAGATGCTTGTGCAAGAAATTCGATAAAGCCAGAACAATGGTGCACGAGCTGGTGGCATCAGTTCAAAGTACTATTGCAAAGGGGAGTGAGGGAGCGAAGGTATGAAGCCTTCAACAGGCTGAGAATATTCCAAGTTGTAAGTGTTGCTTTTCTTGGTGGACTATTGTGGTGGCATACTCCAGAGTCACACATTGAAGATCGGGTTGCCTTGCTCTTTTTCTTTTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCAGTTTTCACATTCCCTCAAGAGAGGAGAATGCTGATCAAGGAACGGTCGTCTGGAATGTACCGCCTTTCTTCCTACTTTCTAGCTAGAACAATAGGAGACTTGCCCCTGGAGCTTGCACTTCCAACTGCATTTGTCTTCATAATCTATTGGATGGGAGGGCTTAAACCTGATCCTGTGACTTTTATCCTTTCACTTCTTGTGGTGCTTTACAGTGTTGTTGTCTCTCAAAGCCTTGGCTTAGCATTTGGTGCTATTTTGATGGAGGTTAAACAAGCAACTACTCTAGCTTCTGTGACAACCCTTGTGTTTCTCATTGCTGGAGGGTACTATATACAACAGATTCCTCCATTCATAGTGTGGCTCAAGTACTTGAGCTACAGCTACTACTGTTACAAGCTGCTTTTAGGTGTCCAGTACAATGAAAATGACTATTATCAATGCTCAACGGGGGAGCTGTGCAAAGTTGCAGACTTTCCTCCTATCAAATCAATGGGCTTGAATCATTTGTGGGTTGATGTGTGCATTATGGCCATGATGTTGGTGGGTTATCGACTAGTTGCTTATTTAGCACTGCATAGAGTTAGGTAG 1983 0.4579 MPQNCIAPKPEYCNSTHHSVEEPPEMTEPHDSTVISYPMQTNEQQQQPFPKLIMYPITLKFEELVYKVKLEQKGGCWGSTWTCKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLSGKLSGKITYNGQPFSGAMKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPNSLCRDEKVQHVERVITELGLTRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKHLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALDYFSSVGFSTCVTVNPADLLLDLANGIAPDSKHATEQSEGLEQERKQVRESLISAYEKNIATRLKSEVCSLEANNYNITKDACARNSIKPEQWCTSWWHQFKVLLQRGVRERRYEAFNRLRIFQVVSVAFLGGLLWWHTPESHIEDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPVTFILSLLVVLYSVVVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKYLSYSYYCYKLLLGVQYNENDYYQCSTGELCKVADFPPIKSMGLNHLWVDVCIMAMMLVGYRLVAYLALHRVR 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00825 660 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 303 IPR027417 -
Gma11g00825 660 CDD ABCG_EPDR 56 293 - -
Gma11g00825 660 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 46 658 - -
Gma11g00825 660 Pfam ABC-2 type transporter 268 363 IPR043926 GO:0140359
Gma11g00825 660 Pfam ABC transporter 90 239 IPR003439 GO:0005524
Gma11g00825 660 ProSitePatterns ABC transporters family signature. 211 225 IPR017871 GO:0005524
Gma11g00825 660 Gene3D - 78 305 IPR027417 -
Gma11g00825 660 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 311 IPR003439 GO:0005524
Gma11g00825 660 Pfam ABC-2 type transporter 399 604 IPR013525 GO:0016020|GO:0140359
Gma11g00825 660 Coils Coil 330 350 - -
Gma11g00825 660 SMART AAA_5 98 288 IPR003593 -
Gma11g00825 660 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 46 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00825 Gma-Chr11 6946803 6950343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00825 88 287 Calmodulin-binding Proteins AT2G36910 29.858 9.33e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00825 K05681 - gmx:100794774 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00825 11 6946803 6950343 Gma11g00825 11 6946803 6950343 ECH
Gma01g01585 01 51411160 51414018 Gma11g00825 11 6946803 6950343 GST
Gma11g00825 11 6946803 6950343 Gma16g01013 16 25442738 25446097 PCT
Gma16g01013 16 25442738 25446097 Gma11g00825 11 6946803 6950343 PCT