Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00822 ATGGCAGCAGTGACAGTGGCAGTGGGAGGAGACATATGGAAGGCCCATGTAGCCATGGCGTTTGTTCAGCTATTCAATGGAGGTTACCATGTCATCACCAAAGTGGCCCTTAATGTTGGCATCAACCAGTTAGTTTTCTGTGTCTTCCGTGATCTCCTTGCCCTTTCCATCCTCGCACCCCTCGCTTATGTCCGTGAAAAACGGATTCGACCACCCACTACTAAGAACCTCCTGATTTCATTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCGGCTGCCATACAGCCATCCATTCCAGTCTTTACCTTTCTGTTGGCTGTAATGATGGGTACAGAAAGAGTGAACTTACTCAGATATGATGGTCTGGCAAAAGTTGGAGGAACTATTATCTGTGTCTCTGGTGCCATATTTATGGTTTTGTATCGTGGTCCAGCTTTGATAGGATATGCCGAACTCGGTCATGTAACACAAAATGAAATAAGTGCCAGAGGTCAGCCAGAGCCATCTGGATGGTTAATTGGTGGCTTACAGAACCTTGGGTTTGACAATTTTCATCTTGGAGTTTTGTGCTTGATAGGGAACTGCATTTGCATGGCTGCATTTCTAGCCATTCAGGCATCGGTATTAAAAAAATATCCTGCAAACCTATCTGTCACAGCGTGTTCATACTTCTTTGGAGCTTTACTGATGGTGACAGTATCATTATTCATGACTACTGAGTCAACTGACTGGAGTTTGACGTCATCAGAAATACTTGCTGTTATTTATGCTGGAAGTATTGCATCTGCCCTTAACTATGGACTCATTACATGGTGCAACAAGATCATAGGGCCAGCCATGGTTGCCCTTTACAATCCGCTTCAACCTGCGTTTTCTGCCATCCTGTCCCAAATTTTCCTTGGAAGTCCAATTTACTTGGGAAGCATCATAGGAGGATCTTTTATCATTGCCGGTCTATATATGGTTACTTGGGCATCTTCTAGAGAAAGACAGGCAACTGTTGGAGTTACTCCTCATAGCTCTTGGGTCTCTGAACCACTTATTCATGAAAGAAGTGCACACCAGAGAGGTCTTGTTTTTTCGGTGTCCGCTAGCGTATCCCCAAAATCATCATCAGATTAA 1173 0.4348 MAAVTVAVGGDIWKAHVAMAFVQLFNGGYHVITKVALNVGINQLVFCVFRDLLALSILAPLAYVREKRIRPPTTKNLLISFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPSIPVFTFLLAVMMGTERVNLLRYDGLAKVGGTIICVSGAIFMVLYRGPALIGYAELGHVTQNEISARGQPEPSGWLIGGLQNLGFDNFHLGVLCLIGNCICMAAFLAIQASVLKKYPANLSVTACSYFFGALLMVTVSLFMTTESTDWSLTSSEILAVIYAGSIASALNYGLITWCNKIIGPAMVALYNPLQPAFSAILSQIFLGSPIYLGSIIGGSFIIAGLYMVTWASSRERQATVGVTPHSSWVSEPLIHERSAHQRGLVFSVSASVSPKSSSD 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00822 390 Pfam EamA-like transporter family 203 340 IPR000620 GO:0016020|GO:0016021
Gma11g00822 390 Pfam EamA-like transporter family 19 155 IPR000620 GO:0016020|GO:0016021
Gma11g00822 390 PANTHER WAT1-RELATED PROTEIN 13 382 IPR030184 GO:0016021|GO:0022857
Gma11g00822 390 PANTHER WAT1-RELATED PROTEIN 13 382 - -
Gma11g00822 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 346 - -
Gma11g00822 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00822 Gma-Chr11 6898024 6902962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00822 98 372 Nodulin-like Gene Family AT5G45370 63.799 4.06e-125 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00822 - - gmx:100787738 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00822 11 6898024 6902962 Gma16g01021 16 25768418 25775738 PCT
Gma16g01021 16 25768418 25775738 Gma11g00822 11 6898024 6902962 PCT