LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma11g00813	ATGTCTTGTTCTAATTATGCTAGAAGCTGTACCTTCTTTTATCTGTTTCTTGCAGTGCTTCTTGCAAAAACTAGCTCTTGCTTCTCTGCCAAGGTGTATGTAGTGTACATGGGAAGCAAAACTGGGGAGGACCCAGATGATATTCTGAAGCACAATCATCAAATGCTTGCATCTGTTCACAGTGGAAGTATTGAGCAAGCCCAAGCTTCCCATGTTTATAGCTACAAACATGCTTTTAGAGGTTTTGCAGCCAAGTTGACTAATGAACAGGCTTACCAAATTTCCAAAATGCCAGGGGTGGTATCTGTTTTTCCCAATGCTAAAAGAAAGCTTCACACCACTCATTCATGGGATTTCATAGGACTTTTGGGCAATGAATCAATGGAGATTCATGGGCACTCCACCAAAAACCAAGAAAATATAATCATTGGTTTCATTGATACGGGAATTTGGCCTGAATCCTCAAGTTTTAGTGACACCGACATGCCCCCGGTGCCCCGGGGATGGAAAGGCCATTGTCAATTAGGAGAAGCATTCAATGCTTCATCATGCAACAGGAAAGTGATAGGAGCAAGATACTACATCAGTGGACATGAAGCAGAAGAAGAGTCAGACAGAGAAGTCTCTTTCATATCTGCCAGAGATAGCTCAGGTCATGGTAGCCACACAGCTTCCACGGCCGCAGGACGCTACGTGGCAAACATGAATTACAAGGGTCTAGCAGCTGGAGGAGCAAGGGGAGGTGCACCAAAGGCTAGAATTGCGGTGTACAAAGTATGCTGGGACTCAGGTTGCTATGATGTGGACTTGTTAGCTGCATTTGATGATGCCATAAGAGATGGTGTTCACATTATATCTTTGTCTCTTGGTCCTGAATCTCCCCAAGGTGACTATTTCAGTGATGCCGTATCTGTGGCATCATTCCATGCTGCTAAACATAGAGTGCTGGTGGTAGCATCAGTTGGAAATCAAGGAAATCCTGGTTCTGCGACGAACGTTGCACCGTGGATTATCACAGTTGCTGCTAGCTCAATAGATAGGAACTTCACCTCTGATATCACACTAGGGAATGGTGTTAACATCACGGGTGAGAGTCTCAGCCTCTTAGGAATGGATGCATCTAGAAGATTGATTGATGCATCTGAAGCCTTTTCTGGATATTTCACTCCTTATCAATCCAGTTACTGTGTGGATAGTTCCCTGAATAAGACCAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCAGAGTATTCAGGGGAGTCAAAGTTGGAAAAGAGTAAGATAGTGAAGAAGGCAGGTGGTGTTGGGATGATACTCATTGATGAAGCAAATCAAGGTGTTTCCACCCCATTTGTGATACCTTCAGCTGTTGTTGGAACAAAAACAGGAGAACGAATTCTATCCTATATCAATAGCACACGTATGCCTATGTCAAGGATTTCCAAAGCCAAGACAGTGCTAGGAGTCCAGCCGGCACCCCGTGTAGCAGCATTTTCTTCGAAAGGACCCAATGCATTAACCCCAGAAATTTTGAAGCCTGATGTTACAGCTCCCGGATTAAACATCCTTGCAGCATGGTCTCCAGCCTCAGCTGGAATGAAGTTCAATATTATATCAGGAACTTCTATGTCTTGTCCTCACATAACTGGAATTGCAACCTTGGTCAAAGCTGTGCATCCTTCATGGTCTCCGTCTGCTATCAAATCTGCCATCATGACAACTGCAACAATTTTGGATAAGCACCACCAACCCATTAGAGCGGATCCTGATAGAAGACGGGCTAATGCTTTTGATTATGGATCAGGGTTTGTGAACCCTTCAAGAGTTCTGGATCCTGGTCTCGTCTACGATTCACATCCAGAAGATTTTGTTGCATTCTTATGTTCACTTGGTTATGACGAGAGGTCACTCCACCTTGTCACAGGAGACAACAGCACATGTGATAGGGCATTCAAAACACCATCTGACCTCAACTATCCATCTATTGCAGTGCCAAATCTTGAAGACAACTTTTCAGTAACTCGAGTTGTGACTAATGTCGGAAAAGCAAGAAGTATATATAAAGCTGTAGTGGTGTCTCCTGCTGGAGTTAATGTTACTGTTGTGCCAAATCGGTTAGTTTTCACAAGAATAGGAGAGAAGATCAAGTTCACTGTGAATTTCAAAGTTGTTGCTCCCTCAAAGGATTATGCATTTGGGTTCTTGTCATGGAAGAATGGAAGAACACAGGTCACGAGTCCTTTAGTGATCAAGGTTGCACCAGCAAGTCATGGGTTGGTGAGATAG	2289	0.4395	MSCSNYARSCTFFYLFLAVLLAKTSSCFSAKVYVVYMGSKTGEDPDDILKHNHQMLASVHSGSIEQAQASHVYSYKHAFRGFAAKLTNEQAYQISKMPGVVSVFPNAKRKLHTTHSWDFIGLLGNESMEIHGHSTKNQENIIIGFIDTGIWPESSSFSDTDMPPVPRGWKGHCQLGEAFNASSCNRKVIGARYYISGHEAEEESDREVSFISARDSSGHGSHTASTAAGRYVANMNYKGLAAGGARGGAPKARIAVYKVCWDSGCYDVDLLAAFDDAIRDGVHIISLSLGPESPQGDYFSDAVSVASFHAAKHRVLVVASVGNQGNPGSATNVAPWIITVAASSIDRNFTSDITLGNGVNITGESLSLLGMDASRRLIDASEAFSGYFTPYQSSYCVDSSLNKTKAKGKVLVCRHAEYSGESKLEKSKIVKKAGGVGMILIDEANQGVSTPFVIPSAVVGTKTGERILSYINSTRMPMSRISKAKTVLGVQPAPRVAAFSSKGPNALTPEILKPDVTAPGLNILAAWSPASAGMKFNIISGTSMSCPHITGIATLVKAVHPSWSPSAIKSAIMTTATILDKHHQPIRADPDRRRANAFDYGSGFVNPSRVLDPGLVYDSHPEDFVAFLCSLGYDERSLHLVTGDNSTCDRAFKTPSDLNYPSIAVPNLEDNFSVTRVVTNVGKARSIYKAVVVSPAGVNVTVVPNRLVFTRIGEKIKFTVNFKVVAPSKDYAFGFLSWKNGRTQVTSPLVIKVAPASHGLVR	762

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma11g00813	762	Pfam	Fibronectin type-III domain	657	751	IPR041469	-
Gma11g00813	762	Pfam	Peptidase inhibitor I9	32	112	IPR010259	-
Gma11g00813	762	SUPERFAMILY	Subtilisin-like	13	712	IPR036852	GO:0004252\|GO:0006508
Gma11g00813	762	Gene3D	Peptidase S8/S53 domain	140	624	IPR036852	GO:0004252\|GO:0006508
Gma11g00813	762	Gene3D	-	346	488	-	-
Gma11g00813	762	ProSiteProfiles	Serine proteases, subtilase domain profile.	116	611	-	-
Gma11g00813	762	Pfam	PA domain	386	467	IPR003137	-
Gma11g00813	762	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	21	112	IPR037045	-
Gma11g00813	762	ProSitePatterns	Serine proteases, subtilase family, serine active site.	541	551	IPR023828	-
Gma11g00813	762	Gene3D	-	628	754	-	-

Showing 1 to 10 of 18 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma11g00813	Gma-Chr11	6832096	6836196	Wgd

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma11g00813	19	753	Subtilisin-like Serine Gene Family	AT2G04160	43.359	0.0	569

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma11g00813	-		-	gmx:100784026	1513.05

Showing 1 to 1 of 1 entries

Previous1Next

Event-related genes

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma11g00813	11	6832096	6836196	Gma11g00813	11	6832096	6836196	ECH
	Gma01g01597	01	51568305	51572622	Gma11g00813	11	6832096	6836196	GST

Showing 1 to 2 of 2 entries

Previous1Next