Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00793 ATGTCGTGTTCGTCGTCATCTGGGTCGGAGGAAGACGATGAGGGATTCGACTCTTACCGGAAAGGAGGCTACCACGCCGTCAGAGTCGCCGATCAGTTCGCCGCCGGCAGGTACATAGCGCAGAGAAAGTTGGGTTGGGGTCAGTTTTCCACCGTGTGGCTCGCTTACGATACTAAAACTGAGTCATATGTTGCTCTCAAGATCCAGAAAAGTTCGGCCCAGTTTGCTCAGGCTGCCCTTCATGAGATCAATCTTCTTTCATCCATTGCTGACCGTGATCCGTCAAATTCCAAATTTGTTATTCAATTGATTGACCACTTTAAGCACACTGGTCCAAATGGACAGCATCTTTGCATGGTTCTTGAGTTTCTTGGCGATAGCTTGCTTCGCCTGATCAGATATAACCGTTATAAAGGTCTTCCATTGAATAAAGTTAGAGAGATTTGCAAGTGTGTGTTGATTGGTTTGGATTACTTACATACTGATCTTGGTATGATCCACACTGATCTAAAACCTGAAAACATTCTTCTATGTTCAACCATTGATCCTGCCAAAGACCCTTCAAGATCTGGACTCTCCCCAATTCTAGAGCGGCTTGAGGGAAACACGAATGGTGGAGTTACAAGTCTTATTGAGAAAAGGTTGAAAAGGAGAGCAAGGACAGCAATTGCTAAGATATCTGGAAGAAGAGCATCAATGGGAGGAACAGGAGATGTTGCAAAGACTGGTAGAAATATCGATGGGATTGATGTGAGATGCAAGATAGTAGATTTTGGAAATGCTTGTTGGGCTGATAAGCAGTTTGCAGAAGAAATACAGACAAGGCAGTATAGAGCACCTGAAGTTATACTAAAGGCTGGCTATTCCTTCTCCGTTGACATGTGGTCTTTAGCTTGCATTGCTTTTGAACTTGCCACTGGAGATATGTTGTTTACACCCAAGGGCGGACAAGGTTTTAGTGAGGATGAGGATCACCTTGCCCTAATGATGGAACTCCTTGGAAAGATGCCGCGGAAGATCGCTACTGCTGGAGCTCAATCCAAGGATTTCTTTGACAGGCATGGGGATCTAAAAAGGATTCGAAGGCTAAAATTTTGTCCACTTGACAAATTGTTGACTGATAAATATAAATTTTCAGTGAATGATGCTCAAGAGTTTTCAGAATTTCTTCTACCACTCTTTGATTTTGCGCCAGAGAAGCGACCAACCGCGCGACAGTGCCTGCAACACCCATGGCTGAACTGCATGGAATCTCCTCCAAATGAAATGAGAAATGAATCTGCTGTGGAAAAGGTAGATGTTGTGATGAGCAAACTTAAAATCAGGGTGGGAAAGTGA 1338 0.4402 MSCSSSSGSEEDDEGFDSYRKGGYHAVRVADQFAAGRYIAQRKLGWGQFSTVWLAYDTKTESYVALKIQKSSAQFAQAALHEINLLSSIADRDPSNSKFVIQLIDHFKHTGPNGQHLCMVLEFLGDSLLRLIRYNRYKGLPLNKVREICKCVLIGLDYLHTDLGMIHTDLKPENILLCSTIDPAKDPSRSGLSPILERLEGNTNGGVTSLIEKRLKRRARTAIAKISGRRASMGGTGDVAKTGRNIDGIDVRCKIVDFGNACWADKQFAEEIQTRQYRAPEVILKAGYSFSVDMWSLACIAFELATGDMLFTPKGGQGFSEDEDHLALMMELLGKMPRKIATAGAQSKDFFDRHGDLKRIRRLKFCPLDKLLTDKYKFSVNDAQEFSEFLLPLFDFAPEKRPTARQCLQHPWLNCMESPPNEMRNESAVEKVDVVMSKLKIRVGK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00793 445 Gene3D Transferase(Phosphotransferase) domain 1 92 413 - -
Gma11g00793 445 Pfam Protein kinase domain 252 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00793 445 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00793 445 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Gma11g00793 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Gma11g00793 445 CDD STKc_SRPK 27 413 - -
Gma11g00793 445 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Gma11g00793 445 SMART serkin_6 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00793 445 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 5 445 - -
Gma11g00793 445 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 445 - -
Gma11g00793 445 ProSiteProfiles Protein kinase domain profile. 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00793 445 SUPERFAMILY Protein kinase-like (PK-like) 32 422 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00793 Gma-Chr11 6607780 6612108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00793 4 414 EF-hand Containing Proteins AT5G22840 49.892 5.93e-165 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Gma11g00793 Pkinase 7.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00793 K08832 - gmx:100784192 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01619 01 51885473 51889345 Gma11g00793 11 6607780 6612108 GST