Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00788 ATGGGAGGCTTATTACACTTTTTTGAATTCAATCAAGGGAGGATGGCCAAGAAAGTCCTTGCTCGTAAGAGACATCATGGTGGCCTGGAAGCTCCTCGTAATAGTCTAGATCTGCAAGTACAAACACCTCAGAACTACTGTCCAGAAGGAGAATTACCATACAATTATCAAGTAAAAGAAGAGGGAAGGTCTGAGAAAAACCGCTATTCAAATGTGGGTTCAATGAAAAAACTGATCAATGAGGAACTATCCAAACAATCAAGCACCAGACAAAATGCGCCAAGCCTTGTAGCAAGGTTGATGGGGATAGATACGATGCCATTAGACACTAAATATGTTGTTCCATCAGACAGAAAAATAAGTGAAAACATGGGGAAGAGGTCTTCAGTCAAAGGAGTGAATCGAAGGGGTTCAGTTAGTTGGGGTTCTTCCAACTTTAATTCTTCTAGTCAGATGGATTTTGATTCATTATATAAAGACATAGGTGATGATGATGATGGATGGAACCAGAGTTTTGGAGAACTAAGGCCACGGGAACATCCTCAGGAAGAGGAACTCCAAAAATTCAAGAAAGAGTTTGAAGCATACCAAGCAGCAAGGTTTCTGGAGTGTTCAAAGGTTGCTGAAATTGGCAGTGCTCCTAGACAATTGCTTGCTCAAGAAAACCTGAACAAGGAAAAGATGATGCATAACGATTCAGTTTTACACAGAGCGGCAGCAGGGAAGCTTGCAGATCTTGACAGGCATGCATTCAAAACGCCACCTGAAAGTTATGGTTCAGAATATCATGGTAAAGTGATGGAGTTAATCCCAGCTATGCAAAGGAAAACCATTCCTCCAAGGAGCAGAACACTAAGTAGAGACTTTGAGGAGTCCTTAATGATGAAATCTTGCAACAAATTAGACACGTCTTCTTCTCCCACTAGGATAGTTATCTTGAAGCCTGGTCCTGATAGCATTTGCAACCATGAAGAAAATTTGACCATATCATCAGGAACTATACAAGGGAGAAATAGTATAGAAGATTTTCTTGAAGAGGTGAAAGAGCGTTTGAAATGTGAACTGCAAGGGAAAATTGTCAAAAAAGGTTCTGTGGTTCGAGGGAATGGAATTGAGACACCTTACAATGAAAAGCCATCTGATCCTAAACTAATAGCCCGTCACATAGTAAAGCAAGTCAGAGAAAGTGTGAGTAGAGATACTGGCACAAATTTACTCCACTCAGAATCAATAGGATCATACAAAAGTGAAATGGAGTTCAATGGACCAAGCTCCCCAGAATTTATCAGCAGAGATACCAGGAGGTTCTTGTCAGAGAGGCTAAGAAATGTTGGGAGAAGTGAAGCACATGCTGACATTCCTGAGGGAAAATCAAGTTCACTTTCACTAGACAACCATAAAGCTAGACTAAAGCAAGTGGGGGATGCAAATAACTGGGAAATTTCCAAAGAGGACACAGCAATACAAACAGGATCTTTCAGGCATGAACTCGATGAGAATATATTTCTCCACAAGGAGTTATCACCAAGAAACCTTGTAAGATCCTTGTCTGCTCCTGTATCACGTTCAGGAACATCATTTGGTAAGCTTCTTCTAGAGGACCGCCACATTTTAACTGGTGCTCAGATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGTCTGTTGATGTCAAGAAACGGAAAAAGGATAGATTTAATATTAAAGAAAGAGTCTCCAATTTTAGATATAACCTTGCTTTAAGAGGGAGGCTTTTTGGCAGAAGGGTTCAATCAATGGTAGAATCACATGGCAATGAATTTGGTCCCTTTGTGAGAGATGTCACAAGTGGACCAACAGTTCTCATGAACTGTGGTGTGAGGCATGAGAACTCCACTGAGGTACCTCCTAGTCCTGCTTCTGTGTGCAGCAGTGTTCACGAAGACTTTTGGAGGCAAACTGAATATTTAAGTCCAATATCAACTCCTGATGTGTCTTCAAGAGACGATAATGTTGTGCCCCAGGTTTTCAGGGATATCAGCTCTGGTTTGAGTGAGCTAAGGAGACAACTCAATCAACTTGAATCTGATGGTCCTGAGGATTTGACTATGAAACAGGAGCCTGCTGAGTCTGAATTAGACCAATTAGAGGATCCAGCAGAATCTTACGTAAGAGATCTACTTGTTTCTTCTGGTCTGTACTTTGGTTCATGGGATAAATCTTTATTAAGAGGGGACACATTTGCAAAACCTATTGGCAACTCTGTTTATGAAGAAGTGGAAGAATCTCACAAGAAATTGGTCAAGGAAAATGATGAAATCTGTATCAAGGATCAGAATGAGAGTAAGCTAGACCACAAAGTTTTGCTTGATTTGTTAAATGAGGCACTTTCAGTTGTTCTTGGACCTCCTTTGACATTGTCTAGGTTCAGGAGGAAATTACGCAACTCTTCCATTTTGCCACCTTCTGGAAAGGAACTGTTGAGCTTAGTGTGGGACGTTATCCGTGTTTCTTTATATCCTCCATCTGACATATCTACTTATTCACTTGATACTTTGGTGGCTCAACACCTAGGATCCATCCCTTGGTCTGGATTAATAAATGATGAGATCAATATTTTGGAAAGAGATATAGAATGTCTAATAACTGATGATCTGGTTGAAGAACTCACAAAGGATATGTTCTAA 2664 0.4054 MGGLLHFFEFNQGRMAKKVLARKRHHGGLEAPRNSLDLQVQTPQNYCPEGELPYNYQVKEEGRSEKNRYSNVGSMKKLINEELSKQSSTRQNAPSLVARLMGIDTMPLDTKYVVPSDRKISENMGKRSSVKGVNRRGSVSWGSSNFNSSSQMDFDSLYKDIGDDDDGWNQSFGELRPREHPQEEELQKFKKEFEAYQAARFLECSKVAEIGSAPRQLLAQENLNKEKMMHNDSVLHRAAAGKLADLDRHAFKTPPESYGSEYHGKVMELIPAMQRKTIPPRSRTLSRDFEESLMMKSCNKLDTSSSPTRIVILKPGPDSICNHEENLTISSGTIQGRNSIEDFLEEVKERLKCELQGKIVKKGSVVRGNGIETPYNEKPSDPKLIARHIVKQVRESVSRDTGTNLLHSESIGSYKSEMEFNGPSSPEFISRDTRRFLSERLRNVGRSEAHADIPEGKSSSLSLDNHKARLKQVGDANNWEISKEDTAIQTGSFRHELDENIFLHKELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAQIRRKLEAVETMSVDVKKRKKDRFNIKERVSNFRYNLALRGRLFGRRVQSMVESHGNEFGPFVRDVTSGPTVLMNCGVRHENSTEVPPSPASVCSSVHEDFWRQTEYLSPISTPDVSSRDDNVVPQVFRDISSGLSELRRQLNQLESDGPEDLTMKQEPAESELDQLEDPAESYVRDLLVSSGLYFGSWDKSLLRGDTFAKPIGNSVYEEVEESHKKLVKENDEICIKDQNESKLDHKVLLDLLNEALSVVLGPPLTLSRFRRKLRNSSILPPSGKELLSLVWDVIRVSLYPPSDISTYSLDTLVAQHLGSIPWSGLINDEINILERDIECLITDDLVEELTKDMF 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00788 887 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 886 - -
Gma11g00788 887 Pfam DUF761-associated sequence motif 89 107 IPR032795 -
Gma11g00788 887 MobiDBLite consensus disorder prediction 687 708 - -
Gma11g00788 887 Coils Coil 669 689 - -
Gma11g00788 887 Pfam Domain of unknown function (DUF4378) 714 881 IPR025486 -
Gma11g00788 887 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00788 Gma-Chr11 6574318 6580222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00788 75 886 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 40.824 9.25e-159 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00788 - - gmx:100779720 1733
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00788 11 6574318 6580222 Gma11g00788 11 6574318 6580222 ECH
Gma01g01623 01 51927306 51931915 Gma11g00788 11 6574318 6580222 GST
Gma11g00788 11 6574318 6580222 Gma16g01083 16 27360350 27364112 PCT
Gma16g01083 16 27360350 27364112 Gma11g00788 11 6574318 6580222 PCT