Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00781 ATGGATTCCTCGCACACCAACACCACTTTGCTCACCAACCTACTAGTCTTCAACAACACCCTCCAACCAGAGTTGATGAGGAGCGTGCATGTGTACCGCCGAGGGGGTGGAGAGAAAAGGGAAGTTGAGAGAGAGTTTGTGTTTTCAGAGAGTGGCTCCTATGTGGAAATGCAGGCTACCCCAATTCCTGGATTGGTGAAATCTCGTGTTTCTGAAGTGTGTGAAGGGCACCGGAATGGAGTGTGGCTTTGTGTCTTTGCGTTTCATGCCGATCACACTCCTCAATTTTGCCGCATTCCACGGCTTTTGTTGGTTACAAGAAACCCAAAGCTTAAGATGATTCCAAACTTGCTTGATGATCTCCACATGATATACAAGTTGAACCGGAAGGAGGAAGACAGAGATATAGCCCAAGACTCTACAGGAGAAGAAAGGCAAGGACACAGCAACAATTTCCAACCATCACGAAAAGTCTTTCCCGTTCTTGATCAGGATCTCAATTTTCTTCCTTATGAAGACTATGAGTCTGAGTCACCGGACAATGAGACAGATGTTGAAAGCTCACCAGGTTTTCTAGTGAAGAAAAAGAGGGCACCCAGTGATCTTGTAGCAAAAATTTCTTTATCAGATTTGGTGAAGTACTTTGGTATGCCAATTGTAGAAGCATCAAGAAATCTAAATGTTGGGCTTACTGTTCTAAAGAGAAAGTGCAGAGAATTTGGTATTCCCCGCTGGCCTCATAGGAAGATCAAATCACTTGACAGTCTCATTCATGATCTTCAGGAAGAGGCAAAGAACCAAGAATTGGAGGACAGGGAAGCAGCTATGGCCGTGGCAAAGAGGCAAAGGATGTTGGAGAGTGAAAAGGAAAACATAGAGAAGAAACCCTTCATGGACATAAAAATTGAGACCAAGAGATTCAGGCAAGATGTTTTCAAGAGAAGACACAGAGCTAGAGCTGTTGAAAAACACAATTCTACACTGCCACTAGTACTCATCCTCATCCTCAACCTCAAGTCTCTAATACTAAACATGGGTGTCTGCTTTGCTTCGCTCGCTCGCCACCAAACACCCTCTAAATCCATTCCCTACGCAGGTTCAGGGCGTGAGTCCTTGGGGAGCAAGGATGAGAATATGGGGATTACTGAAAGCACTAGTAGTGTTAATGGAGGAAGCTGTAGTAGTCATAGCAGCAAGAACATTGTGTTTCCTAGCGTGGAAGTGCGGAACCTGAAGGAGTTCAGTTTTGCGAATCTGAAAGCAGCCACCAAGAGTTTCAAATCGGATGCATTGCTTGGAGAAGGAGGTTTCGGAAAAGTATACAAAGGATGGTTGGATGAGAAGACACTGGCACCGACCAAAGCTGGTTCTGGAATCATGGTTGCTATTAAGAAATTGAATCCCGAAAGTATGCAGGGCCTTCGAGAGTGGCAGTCAGAAATCGACTTTCTAGGAATGATTTCGCACCCAAACCTGGTCAAGCTTTTGGGTTACTGTTGTGACGATGTCGAATTtcttcttgtgtacgaattcatgccaaagggaagcttggagaatcatctATTTTGGAGAAATACAAACACAGAACCGCTCTCTTGGGACACTCGAATCAAAATAGCTATTGGTGCTGCTCGGGGCTTGGCTTACTTGCACACCTCAGAAAAGCAAATCATATACAGAGATTTCAAAGCCTCCAACATACTACTTGATGAGGATTACAACGCAAAAATTTCAGATTTTGGCTTGGCGAAATTAGGGCCTTCGGGTGGAGATTCACACGTGAGTACGAGGATCATGGGAACATATGGCTATGCTGCTCCAGAATACGTTGCAACAGGACACCTTTACGTGAAGAGTGATGTTTATGGTTTTGGTGTGGTGCTGCTTGAAATGCTGACAGGGATGAGGGCAATTGATAGAAACCGCCCCATAGAGCAGCAGAATCTAGTTGAATGGGCCAAGCCTTCTCTCTCTGATAAAAGCAAGTTTAAAAGCATTATGGATGAAAGGATAGAGGGTCAGTATTCAACCAAGGCAGCATTGAAAGCAACACAGCTTACTCTAAAATGCCTTGAACGTGACCTTAAAAAACGTCCTCATATGAAAGATGTTCTCGAGACATTGGAATGCATAAAAGCTATCAAGGTTACGAGGAAGGAAGGCAAAAAACGTTGTTCTAAGTTTGCAACTACCAACAATGTACAATAG 2208 0.4321 MDSSHTNTTLLTNLLVFNNTLQPELMRSVHVYRRGGGEKREVEREFVFSESGSYVEMQATPIPGLVKSRVSEVCEGHRNGVWLCVFAFHADHTPQFCRIPRLLLVTRNPKLKMIPNLLDDLHMIYKLNRKEEDRDIAQDSTGEERQGHSNNFQPSRKVFPVLDQDLNFLPYEDYESESPDNETDVESSPGFLVKKKRAPSDLVAKISLSDLVKYFGMPIVEASRNLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHDLQEEAKNQELEDREAAMAVAKRQRMLESEKENIEKKPFMDIKIETKRFRQDVFKRRHRARAVEKHNSTLPLVLILILNLKSLILNMGVCFASLARHQTPSKSIPYAGSGRESLGSKDENMGITESTSSVNGGSCSSHSSKNIVFPSVEVRNLKEFSFANLKAATKSFKSDALLGEGGFGKVYKGWLDEKTLAPTKAGSGIMVAIKKLNPESMQGLREWQSEIDFLGMISHPNLVKLLGYCCDDVEFLLVYEFMPKGSLENHLFWRNTNTEPLSWDTRIKIAIGAARGLAYLHTSEKQIIYRDFKASNILLDEDYNAKISDFGLAKLGPSGGDSHVSTRIMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGMRAIDRNRPIEQQNLVEWAKPSLSDKSKFKSIMDERIEGQYSTKAALKATQLTLKCLERDLKKRPHMKDVLETLECIKAIKVTRKEGKKRCSKFATTNNVQ 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00781 735 Gene3D Transferase(Phosphotransferase) domain 1 512 733 - -
Gma11g00781 735 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 361 723 - -
Gma11g00781 735 Pfam Protein tyrosine and serine/threonine kinase 429 708 IPR001245 GO:0004672|GO:0006468
Gma11g00781 735 PANTHER OS01G0588500 PROTEIN-RELATED 361 723 - -
Gma11g00781 735 MobiDBLite consensus disorder prediction 363 396 - -
Gma11g00781 735 Coils Coil 250 270 - -
Gma11g00781 735 Pfam RWP-RK domain 206 253 IPR003035 -
Gma11g00781 735 ProSitePatterns Protein kinases ATP-binding region signature. 432 465 IPR017441 GO:0005524
Gma11g00781 735 ProSiteProfiles RWP-RK domain profile. 188 273 IPR003035 -
Gma11g00781 735 MobiDBLite consensus disorder prediction 134 155 - -
Gma11g00781 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 557 569 IPR008271 GO:0004672|GO:0006468
Gma11g00781 735 CDD STKc_IRAK 432 709 - -
Gma11g00781 735 SUPERFAMILY Protein kinase-like (PK-like) 395 708 IPR011009 -
Gma11g00781 735 ProSiteProfiles Protein kinase domain profile. 426 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00781 735 MobiDBLite consensus disorder prediction 377 396 - -
Gma11g00781 735 Gene3D Phosphorylase Kinase; domain 1 397 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00781 Gma-Chr11 6523158 6536052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00781 348 708 Glycoside Hydrolase AT3G07070 45.822 2.35e-99 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma11g00781 PK_Tyr_Ser-Thr 5e-47 CL0016
TF RWP-RK Gma11g00781 PK_Tyr_Ser-Thr 5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00781 - - gmx:100778116 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00781 11 6523158 6536052 Gma11g00781 11 6523158 6536052 ECH
Gma01g01629 01 51973956 51978840 Gma11g00781 11 6523158 6536052 GST