Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00765 ATGGATAATGGAAACGATGAGGAGGGTGGTGAAGGAGAAGTGGGAGCTAAAATGGTACAGAATATAAAAATAAAGTTAGTGTGTGGTAAGGATTCAGGTTCAAGAACAGCCTCGTCGTCTAGCCACAGTTTTTGTCAGGCCGATGAATGTGGTGTGAACTTGAGCATGGCCAAGAGTTACAACCGCCGTCACAAGGTTTGTGAGAGACATGCTAAGGCTCCTGTTGTTTTAGTTTCTAGCATTCGTCAGAGGTTCTGCCAGCAATGTAGTAAGTTCCATGAACTTGCAGAGTTTGATGACACCAAAAGAAGTTGCAGGAAAACATTGGCAGGGCATAATGAGCGTAGAAGAAAAGCTCGCATAGACGTATCCTTAGGAGGTGGTGAACAGCATCAGTCACATTTCTAA 408 0.4412 MDNGNDEEGGEGEVGAKMVQNIKIKLVCGKDSGSRTASSSSHSFCQADECGVNLSMAKSYNRRHKVCERHAKAPVVLVSSIRQRFCQQCSKFHELAEFDDTKRSCRKTLAGHNERRRKARIDVSLGGGEQHQSHF 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00765 135 PANTHER - 3 130 - -
Gma11g00765 135 SUPERFAMILY SBT domain 44 123 IPR036893 GO:0003677|GO:0005634
Gma11g00765 135 ProSiteProfiles Zinc finger SBP-type profile. 42 119 IPR004333 GO:0003677
Gma11g00765 135 Gene3D - 35 106 IPR036893 GO:0003677|GO:0005634
Gma11g00765 135 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 3 130 IPR044817 GO:0003677
Gma11g00765 135 Pfam SBP domain 45 118 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00765 Gma-Chr11 6403418 6404152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00765 44 128 SBP-box Gene Family AT3G15270 65.882 9.59e-35 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Gma11g00765 SBP 1.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00765 - - gmx:100820357 249.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00765 11 6403418 6404152 Gma11g00765 11 6403418 6404152 ECH