Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00742 ATGGCGGATACTGGCGACGACAATGGCGTTACCTATCTTCACGGCGACCTCGATTTGAAAATCATCGAGGCGCGCCACTTGCCCAATATGGACATCTTCTCCGAGCGCCTCCGCCGCTGCGTCACCGCCTGCGACACTATCAAATTCCACTCCGACGCTCCCGCCGCCGCCGACGGCGACGGCGGCAGCCAGCGTACACGGACGCACCATCATCGGAGGATCATCACGAGCGACCCGTACGTCACCGTTTCGGTGCCGCAAGCCACGGTGGCGCGCACGCGCGTGCTGAAGAACGCGCAGAATCCTGTCTGGAAGGAACAGTTCCACATCCCGCTCGCGCATCCCGTGGTGGATTTGGAGTTTCGCGTCAAGGACGACGACGTTTTCGGCGCGCAGAGCATGGGAACGGTCAAAGTCCCGGCGCGGCGGATTGCCACCGGAGCGAAGATTTCCGAGTGGTTTCCGGTTCTGTTGCCGTCCGGGAAGCCGCCGAAGCCGGACACGGCGCTGCACGTGGAGATGCAATTCACTCCGGTGTCGGAAAATTTACTGTACCAGCGAGGCATTGCGGCGGATCCCGAGCACAACGGCGTGAGGCACACGTATTTTCCGGTGAGGAAGGGGAGTTCGGTGAGGCTGTACCAGGACGCACATTGTACGGAATCTGGTGAAGGGAAGATACCGGAGATTAAGCTTGAGAATGGAAATGTTTATAGGCACGGGAAGTGTTGGGAGGATATTTGTTATGCTATTTCTGAGGCTCATCACATGGTGTATTTGGTTGGTTGGTCTATTTATCACAAGGTGAGGCTCGTTAGAGAGCCTACTAGGCCGTTACCGCGAGGTGGCGATTTGACGCTTGGTGAGTTGCTTAAGTATAAGTCTGAAGAAGGGGTGAGAGTGTTGTTGCTGGTTTGGGATGATAAAACTTCGCACGATAAGGTTTTCCTCAAGACGGCTGGTGTGATGGGGACTCATGATGAGGAAACCAGGAAGTTTTTTAAGCATTCTTCTGTTATGTGTGTTCTGTCGCCTCGGTATGCCAGCAGCAAGATGAGCTTCTTGAAGCAACAGGTTGTTGGAACAGTCTTCACACACCACCAAAAATGTGTGATTGTGGACACACAGGCTGCCGGCAATAACCGGAAGATAACTGCTTTTATAGGAGGTCTTGATCTTTGTGATGGTCGCTATGACACACCCGAGCATCGTCTGTTTCGTAATCTTGACGATGTATTTGATGGCGATTTCCACAATCCTACATTTCCTGCTGGAACAAGAGTTCCCAGACAACCTTGGCATGATTTGCACTGTAGAATAGATGGACCTGCTGCATATGATGTTCTTATTAATTTTGAGCAGCGATGGAGAAAAGCAACTAAGTGGAAAGAGTTTGCAATCCTTTTCAAAAAAACCTCTCAATGGCATGATGATGCTTTAATAAGAATAGAACGCATCTCATGGATATTAAGTCCTTCTGGTGCTGCTACCTTAAAGGATAAATCGGATTATTATACTGTTCCAGAGGATGACCCTTTAGTGTGGGTTTCTAGTGAAGACGATCCTGAAAACTGGCATGTTCAGATCTTCCGATCCATTGACTCAGGATCCCTGAAAGGATTTCCCAAACGTGTTGATATTGCTCTGTCCCAGaatcttatctgtgctaaaaatttggttatagacaaaagcattcaaacagcatacattcaagcgatcagatctgctcaacattttatttatattgaaaaccaatacttcattggatcatcgtatGCATGGCCAGCTTATAAAGATGCAGgggctgataatctcatcccaatggaattggcactgaaaattgctagtaaaatcagagctaaggagagatttgctgtctatattattttaccaatgtggccagaaggtgatcctaaaactggggccatgcaagaaatcctcttttggcagGGCCAGACGATGCAAATGATGTATGATGTTGTTGCTAGAGAATTGAAATCAATGCAACTTACTGATGTGCACCCGCAAGAGTACCTCAATTTCTATTGCCTTGGTAATCGAGAACACTTTAATGAAGATAGTTCAAGCACAAATGGTGCACAGGTCTCAACGGCATATaAATatcgccgttttatgatttatgtgcatgctaaagggatgatcgttgatgatgagtatgttataattggatctgctaatataaaccaaagatctatggctggtactaaagatactgagatagctatgggtgcatatcaaccccattacacgtggtcagcaaagaaaagacatccacatggccagATTTATGGTTACAGAATGTCACTTTGGGGAGAGCATCTTGGCATGTTAGATGAAACTTTTGAAGAACCAGGGAGATTGGAGTGTGTGGAAAAAGTGAATGAGATTGCCGAAAACAATTGGAAATTATTCGCTTCTGAAGATTTTTCACTTTTGCAGGGACATCTTCTCAAGTATCCTGTACAGGTAGATTCCGATGGGAAGATTAGATCCCTACCAGACTGTGAAAATTTCCCGGATGCTGGGGGTAAGATATTGGGAGCTCACTCGACAACAATTCCCGATATCCTAACAACTTAA 2601 0.4014 MADTGDDNGVTYLHGDLDLKIIEARHLPNMDIFSERLRRCVTACDTIKFHSDAPAAADGDGGSQRTRTHHHRRIITSDPYVTVSVPQATVARTRVLKNAQNPVWKEQFHIPLAHPVVDLEFRVKDDDVFGAQSMGTVKVPARRIATGAKISEWFPVLLPSGKPPKPDTALHVEMQFTPVSENLLYQRGIAADPEHNGVRHTYFPVRKGSSVRLYQDAHCTESGEGKIPEIKLENGNVYRHGKCWEDICYAISEAHHMVYLVGWSIYHKVRLVREPTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKVFLKTAGVMGTHDEETRKFFKHSSVMCVLSPRYASSKMSFLKQQVVGTVFTHHQKCVIVDTQAAGNNRKITAFIGGLDLCDGRYDTPEHRLFRNLDDVFDGDFHNPTFPAGTRVPRQPWHDLHCRIDGPAAYDVLINFEQRWRKATKWKEFAILFKKTSQWHDDALIRIERISWILSPSGAATLKDKSDYYTVPEDDPLVWVSSEDDPENWHVQIFRSIDSGSLKGFPKRVDIALSQNLICAKNLVIDKSIQTAYIQAIRSAQHFIYIENQYFIGSSYAWPAYKDAGADNLIPMELALKIASKIRAKERFAVYIILPMWPEGDPKTGAMQEILFWQGQTMQMMYDVVARELKSMQLTDVHPQEYLNFYCLGNREHFNEDSSSTNGAQVSTAYKYRRFMIYVHAKGMIVDDEYVIIGSANINQRSMAGTKDTEIAMGAYQPHYTWSAKKRHPHGQIYGYRMSLWGEHLGMLDETFEEPGRLECVEKVNEIAENNWKLFASEDFSLLQGHLLKYPVQVDSDGKIRSLPDCENFPDAGGKILGAHSTTIPDILTT 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00742 866 Pfam C2 domain 15 156 IPR000008 -
Gma11g00742 866 CDD C2_plant_PLD 9 177 - -
Gma11g00742 866 SMART pld_4 362 397 IPR001736 GO:0003824
Gma11g00742 866 SMART pld_4 711 738 IPR001736 GO:0003824
Gma11g00742 866 PANTHER PHOSPHOLIPASE D DELTA 9 866 - -
Gma11g00742 866 SUPERFAMILY Phospholipase D/nuclease 562 782 - -
Gma11g00742 866 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 711 738 IPR001736 GO:0003824
Gma11g00742 866 Gene3D Endonuclease Chain A 537 761 - -
Gma11g00742 866 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 362 397 IPR001736 GO:0003824
Gma11g00742 866 Gene3D Endonuclease Chain A 229 480 - -
Gma11g00742 866 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 179 IPR035892 -
Gma11g00742 866 PANTHER PHOSPHOLIPASE D 9 866 IPR015679 -
Gma11g00742 866 Pfam Phospholipase D C terminal 785 855 IPR024632 -
Gma11g00742 866 Gene3D C2 domain 13 186 IPR035892 -
Gma11g00742 866 SMART C2_3c 16 153 IPR000008 -
Gma11g00742 866 Pfam PLD-like domain 570 747 IPR025202 -
Gma11g00742 866 PIRSF PLD_plant 3 866 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Gma11g00742 866 Pfam Phospholipase D Active site motif 362 397 IPR001736 GO:0003824
Gma11g00742 866 SUPERFAMILY Phospholipase D/nuclease 201 468 - -
Gma11g00742 866 ProSiteProfiles C2 domain profile. 1 154 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00742 Gma-Chr11 6209661 6217212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00742 10 702 Phospholipase D Gene Family (Wang group) AT4G35790 71.408 0.0 1039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00742 K01115 - gmx:100814486 1773.83