Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00712 ATGGCAGAAAACAAAGACGAAATCTATTCTGAATGTTCACCAGGCTCAAACTCTCCAATGGGTAGCAAGTGCAGATACTTGTTTCATAGATTATGCGGTTGTGACACTTCATGGAACAAAAACAGCTCCCCAAAGAGTCGAAGAATTTTCCACAGAGATGTGGAAAAAGAAGAATTCCAGTATGCTAGTAGTCACTGTCTCTCATCCTACTACAGTGTCTTTGTGGTTCGACTAGCAATCATGGTGATGCTAGCCATCTTGATAGGGTTGCTCACTATACTGACATGGCATTTCACCAAGATTTATACAGCAAAATCACTTCGCAGCTTGGCATATGGTTTGCGTTATGAACTTCTGCAACGCCCCGTTTTGAGGATGTGGAATATTTTAAACTCTACTTCTGAAATCACTACAGCTCAGGTCAAACTGTCTCAGTATGTGATCAGACGTCACAGCAACCCTGCGACTCAAGCAGAGCAAGTTGAGCTGTATGAAGCGATGAGGGCTGTAACATGGGCGTTATTTGCTAGTCGAAAAGCTCTAAACTCTATAACTATCAATTATAAGAATGGATTTGTTCAAGCGTTCCACAGAGATCTTAAGGACAACAACACATTTTACATCTATTCTGATCTTTCAAATTACTCCATGGGTGCTAGCAACTCTAATGAGGTCAATTCCATTTCAAAGCACCGAGCTTGGGATGATAAAGGCCTTCATGGTAACTATTCTTCAATCTGGTACCGAGAACCACTTGACCCTGTGAGTGGTGAAAAGATTGGAAAAGCTATGAAAATTGCACCTGAAGACTTGATCAACATCGCTGGACTTTCCCAAGTGCCTGACGGTGTAGCTTCGTGGCATGTCGCAGTGAGCAAGTTCACAGATTCACCATTGCTTTCAGCAGCATTGCCAGTTTGGGACTCTTCTAATAAGACTATTATGGCGGTTGTGGGGGTCACAACTGCACTTTATAGTGTAGGACAGCTAATGAGAGAGCTAGTTGAGATGCACAGTGGCCATATGTATTTGACATCTCAAGAGGGTTACTTACTTGCAACTTCCACAAGTGCACCTCTACTGGAAACTTCAACAAAGCCTCCTAAGCTTAAGATGGCTGTTGACTGTGAAGACAACGTAATTCGACTGGGAGCTGAGTGGTTACAGAGAACTTATGGGAACAATTTTCCTCCAAGTCATGAGATTCATGTAGAGAATGTCAAGCTAGGTCACCAGAGATATTACATTGACTCATTCTTCCTAAATTTAAAGAGACTTCCTTTGGTAGGTGTGATCATCATACCAAGAAAGTATATCATGGGGCAGGTAGATGAAAGAGCCTACAAAACGTTGGTTATTCTGATATCTGCATCATTATGTATTTTAGTCATTGGATGTGTTTGCATTTTGATATTGACAAATGGAGTATCAAAGGAAATGAATCTAAGAGCAGAACTGATAAATCAACTGGAAGCAAGAAGAAAAGCAGAGGCATCAAGCAACTATAAAAGTCAATTCCTTGCAAACATGAGTCATGAACTGAGGACACCTATGGCAGCAGTAATTGGGTTGCTTGACATTCTCATATCAGATGACTGTCTCACAAATGAACAATATTCAACAGTTACTCAAATAAGAAAATGTTCAACTGCTCTGCTCCGTCTTCTTAATAACATCTTGGATCTGAGTAAGGTGGAATCTGGAAAACTGGTCCTAGAAGATGCAGAATTTGACTTAGGAAGGGAACTTGAAGGGCTTGTAGATATGTTTTCTGTTCAGTGCATGAACCACAATGTGGAGACTGTTTTAGACCTGTCTGATGATATGCCAAAGGTAGTCCGTGGAGATTCTGCGAGAGTGGTTCAAATATTTGCAAATCTGATCAACAATTCAATCAAGTTTACTCCATCGGGTCATATTATTCTGCGAGGATGGTGTGAAAACCAAAATTCTTACGTTGGTAGTCCTCTTGACCAGAAGAAATCTCGGAGTTTACAAAAGTGCATAGAGAGGCCAAATGCAAACCATGCAAAGAGAACTTCTGTGAAAGATAACAAAGTGATACTTTGGTTTGAAGTTGACGACACAGGCTGTGGTATTGACCCAAGCAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAGGCTGATCCATCAACTACACGACTGCATGGAGGCACTGGTCTTGGTCTTTGCATTGTGAGAAACTTGGTTAACAAGATGGGTGGAGACATCAGGGTTGTCAAAAAGGAGGGCTCAGGAACACTAATGCGATTATGCTTGCTTCTCAGTGCGCCAATGGATGTCACAGAACAACAGTGTGCAGTAGATTTGACAGACAATGGCTTAGTGGTACTGCTTGCTCTGCATGGCAACATGGGTCGATTAATTACATCCAAGTGGCTACAGAAAAACGGGGTGTGCACAATGGAAGCATCTGACTGGAACGGACTAACTCAAATTTTGAGGGAACTCTTTCATGCAGGAAGTTCAGTTCATAATACTGACTTTGAGGCACACTATCCAGCAAAAGAGGAATTGAAGTCTAAACTACTCAACATAAGAGATATGAGGAACCCGGGTTTTGTCATTGTTGTTGACATTGGACTACTTGACTTGAGTACAGATATATGGAAGGAACAGTTTAACTTCCTCCACAGGTACTTTGGTAGAGCAAAGTTTGTATGGATGTTAAACCATGACACTTCCAATACCATAAAAATGGAGCTCCGTAGGAAAGGGCATATACTTATGGTTAACAAACCCCTTTACAAAGCAAAAATGATTCATATCTTGGAAGCTGTCATAAATGAGAGAAATCTTGAGCTACAAAAGAAAAACATGATAGCTCCAAGGACCACAATGAAAGAGGGTGATTTGCATGAGTTTCTTGAGATTGATTCCACTCATTTTGATGGTGCTAGCTCTGATGATTCTGACATATCAGAAATAAGTGGTTCTAATCCCGTTAGTGCTAATGGAGATAAACCAGTTGAGAAGCTAGAAAACTCTCATCCATCATCACCACACCATATGAATAACTGCCTAGTTAGATTAACAAATGAAAATGAATGTTTGGAAGAACATAATTTGAGGAAAGAAGAATCTTCTAGTCCCAGCTCCAGTTCTGCCACTGAAGACAACCAACCTAAATCACTATCCACCAAAGAATCATCATCCATTTCAACAGAAGATCAGGATGAAGATTCTGAATGTGGGGACACAAATAGGGTCACCAGCTCAAGTAAAGCAGTAGTAGATGGAAAGAAATCTCTTGAGGGCCTAAAGATTTTGCTTGCAGAAGATACACCAGTACTTCAAAGGGTTGCTACCATAATGCTTGAAAAAATGGGAGCAGATGTTGTTGCTGTAGGTGATGGACAACAGGCAGTAGATGCTCTCAATTGCATGTTCACTGCTGAAGACTGTAGAAGAGAATCACTCCAGAAGGAAAGAAACACAAGATCTCAAACAGAGATTTCGACTTGCCGTCCATATGACTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGCTATGAGGCAACAAAAGCAATCAGGAAATCAGAAGTGGGAACAAGCAGGCACATTCCCATTGTTGCTCTTACAGCACATGCAATGTCATGTGATGAAGCCAAATGCCTGGAGGTGGGCATGGATGCTTACTTAACAAAGCCAATTGACTTCAAAATGATGGTGTCCACCATTCTTTCACTCACTAAAAGAACATCTTGA 3735 0.411 MAENKDEIYSECSPGSNSPMGSKCRYLFHRLCGCDTSWNKNSSPKSRRIFHRDVEKEEFQYASSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTAKSLRSLAYGLRYELLQRPVLRMWNILNSTSEITTAQVKLSQYVIRRHSNPATQAEQVELYEAMRAVTWALFASRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLSNYSMGASNSNEVNSISKHRAWDDKGLHGNYSSIWYREPLDPVSGEKIGKAMKIAPEDLINIAGLSQVPDGVASWHVAVSKFTDSPLLSAALPVWDSSNKTIMAVVGVTTALYSVGQLMRELVEMHSGHMYLTSQEGYLLATSTSAPLLETSTKPPKLKMAVDCEDNVIRLGAEWLQRTYGNNFPPSHEIHVENVKLGHQRYYIDSFFLNLKRLPLVGVIIIPRKYIMGQVDERAYKTLVILISASLCILVIGCVCILILTNGVSKEMNLRAELINQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLGRELEGLVDMFSVQCMNHNVETVLDLSDDMPKVVRGDSARVVQIFANLINNSIKFTPSGHIILRGWCENQNSYVGSPLDQKKSRSLQKCIERPNANHAKRTSVKDNKVILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGDIRVVKKEGSGTLMRLCLLLSAPMDVTEQQCAVDLTDNGLVVLLALHGNMGRLITSKWLQKNGVCTMEASDWNGLTQILRELFHAGSSVHNTDFEAHYPAKEELKSKLLNIRDMRNPGFVIVVDIGLLDLSTDIWKEQFNFLHRYFGRAKFVWMLNHDTSNTIKMELRRKGHILMVNKPLYKAKMIHILEAVINERNLELQKKNMIAPRTTMKEGDLHEFLEIDSTHFDGASSDDSDISEISGSNPVSANGDKPVEKLENSHPSSPHHMNNCLVRLTNENECLEEHNLRKEESSSPSSSSATEDNQPKSLSTKESSSISTEDQDEDSECGDTNRVTSSSKAVVDGKKSLEGLKILLAEDTPVLQRVATIMLEKMGADVVAVGDGQQAVDALNCMFTAEDCRRESLQKERNTRSQTEISTCRPYDLILMDCQMPKMDGYEATKAIRKSEVGTSRHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKMMVSTILSLTKRTS 1244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00712 1244 MobiDBLite consensus disorder prediction 1028 1085 - -
Gma11g00712 1244 SMART REC_2 1094 1236 IPR001789 GO:0000160
Gma11g00712 1244 CDD REC_hyHK_CKI1_RcsC-like 1096 1236 - -
Gma11g00712 1244 PRINTS Bacterial sensor protein C-terminal signature 689 703 IPR004358 GO:0016310|GO:0016772
Gma11g00712 1244 PRINTS Bacterial sensor protein C-terminal signature 707 717 IPR004358 GO:0016310|GO:0016772
Gma11g00712 1244 PRINTS Bacterial sensor protein C-terminal signature 724 742 IPR004358 GO:0016310|GO:0016772
Gma11g00712 1244 Gene3D - 490 569 - -
Gma11g00712 1244 SMART HisKA_10 502 568 IPR003661 GO:0000155|GO:0007165
Gma11g00712 1244 SMART HKATPase_4 615 764 IPR003594 -
Gma11g00712 1244 MobiDBLite consensus disorder prediction 1035 1059 - -
Gma11g00712 1244 CDD HisKA 503 564 IPR003661 GO:0000155|GO:0007165
Gma11g00712 1244 SUPERFAMILY CheY-like 1092 1241 IPR011006 -
Gma11g00712 1244 ProSiteProfiles Histidine kinase domain profile. 509 764 IPR005467 -
Gma11g00712 1244 PANTHER TWO-COMPONENT HISTIDINE KINASE 20 1241 - -
Gma11g00712 1244 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 557 760 IPR036890 -
Gma11g00712 1244 Gene3D - 570 765 IPR036890 -
Gma11g00712 1244 MobiDBLite consensus disorder prediction 977 991 - -
Gma11g00712 1244 Gene3D - 1074 1242 - -
Gma11g00712 1244 Coils Coil 1015 1035 - -
Gma11g00712 1244 Pfam His Kinase A (phospho-acceptor) domain 503 568 IPR003661 GO:0000155|GO:0007165
Gma11g00712 1244 PANTHER OSMOSENSOR HISTIDINE KINASE 20 1241 - -
Gma11g00712 1244 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 615 762 IPR003594 -
Gma11g00712 1244 MobiDBLite consensus disorder prediction 971 1012 - -
Gma11g00712 1244 ProSiteProfiles Response regulatory domain profile. 1095 1240 IPR001789 GO:0000160
Gma11g00712 1244 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 490 569 IPR036097 GO:0000155|GO:0007165
Gma11g00712 1244 Pfam Response regulator receiver domain 1096 1235 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00712 Gma-Chr11 5992773 6000606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00712 17 1241 Histidine Kinase Gene Family AT2G17820 64.767 0.0 1590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma11g00712 HATPase_c 4.6e-23 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00712 - - gmx:100807543 2435.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00712 11 5992773 6000606 Gma11g00712 11 5992773 6000606 ECH
Gma11g00712 11 5992773 6000606 Gma02g00424 02 4318581 4325439 PCT
Gma02g00424 02 4318581 4325439 Gma11g00712 11 5992773 6000606 PCT