Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00693 ATGGCCATCAAAAAATCCAATAAACTACCACAAGCTATTGTTCTCAAGCAAATTGTCAAGAGATGCTCAAGTTTTGGCAAGAAGCAGACCTACAATGAAGAGGGTCTTCCTGATGATGTGCCAAAAGGCCATTTTGCGGTCTATGTTGGAGAGAACAGGACCAGATATATTATCCCAATTTCATGGCTGGCTCACCCTCAGTTTCAAATTTTGCTCCAAAGAGCTGAGGAGGAGTTTGGCTTCAACCACGACATGGGACTTACCATACCATGCGATGAAGTTGCATTTGAGTCATTAACTTCCATGATGAGATGA 315 0.4254 MAIKKSNKLPQAIVLKQIVKRCSSFGKKQTYNEEGLPDDVPKGHFAVYVGENRTRYIIPISWLAHPQFQILLQRAEEEFGFNHDMGLTIPCDEVAFESLTSMMR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00693 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Gma11g00693 104 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 104 IPR003676 GO:0009733
Gma11g00693 104 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00693 Gma-Chr11 5790793 5791361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00693 1 99 Calmodulin-binding Proteins AT3G43120 39.604 1.03e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00693 K14488 - gmx:100798840 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00693 11 5790793 5791361 Gma01g01708 01 52780983 52781965 ECH
Gma04g00238 04 2056145 2056770 Gma11g00693 11 5790793 5791361 ECH
Gma16g01211 16 29808105 29808544 Gma11g00693 11 5790793 5791361 ECH
Gma11g00693 11 5790793 5791361 Gma11g00693 11 5790793 5791361 ECH