Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00690 ATGGATCGATCAAAGAATTCGAAGACAGTACGCTGGGCTCAAGAATCTAGTCTTCGTGAGGTGCATGTTTTCTCACCTGATAAAGATTGTTCTTCAATGGTTGGCAAAAAATGTCAAGAACATCTTCAAGCAAAATCATCATCAATATCGCCTTCAACTACGGATGATAATAATGATTTACCACCTGGTTTTAGACCCATTATTGATGTCTCTAGAATTCCTCAAATTAAATGGAAATGTCCTCCTTCGGTTGTTTTGAATTCTGGGTGGCGTATGGCAGCTGGTGAAGAAAGTACAGAGAAAGATAATCAGAAGCAAAGAGAACTGAAAAAGCTTGAAGCAGTTTATCCTCGTGATTCTCACATTCCTGCTGATCCTTTTGTTTCTTCGGATGTGGAGAATGAATTAGGTTACGATGATAGCGACACTCCTCTGGTCCCTCTTGAGTCCGAAGAGGATGTGGAGAATGAATTAGGTTACGATGATAGCGACAGTACTCCTCTGGTCCCTCTTGAGTCCAAAGAGGATATTGCTATTTCAACAGTACCCCCGTCAAATCTGGGGGAGGCAGATGTTGCTACAGCTTTGGCTACTGTAATGGCCATCGTAAAACACAATGAGGAACCAGGGAACTCCATTATTGATGCGAATTTCATCCTTCGATTGGCCAATGACCCGAAAATGTTGAAAGAATTGACTGATTCAAACAATAATAATCCTGAAAATGCATCTCTCACTATGCCTGCACCTCCTCAAATTACAGCAACAGCACAAACATCTCCACCACCTTCTCTGAAACGAGGAACAAAGCGAGCAATACCATCTGGGAGCGAAAGGAAAAGTTGCTCCGAACAGGCGTGGCCCTCTGGTGGTTCAGTGTCTTCGTCTCAACCACGTGTTGTGAAGAAAGATGTGGATTATTATAGGAACCAAGTAACAAAAAATGACTCTGGCAAGGTTAATAAACAATGCAAATTCTACAACACTTCGAAGGGTTGCCGCAATGGCTCTCGTTGTCGCTTTCAGCATACCTCAGTTTGGAAGATGTGA 1050 0.4257 MDRSKNSKTVRWAQESSLREVHVFSPDKDCSSMVGKKCQEHLQAKSSSISPSTTDDNNDLPPGFRPIIDVSRIPQIKWKCPPSVVLNSGWRMAAGEESTEKDNQKQRELKKLEAVYPRDSHIPADPFVSSDVENELGYDDSDTPLVPLESEEDVENELGYDDSDSTPLVPLESKEDIAISTVPPSNLGEADVATALATVMAIVKHNEEPGNSIIDANFILRLANDPKMLKELTDSNNNNPENASLTMPAPPQITATAQTSPPPSLKRGTKRAIPSGSERKSCSEQAWPSGGSVSSSQPRVVKKDVDYYRNQVTKNDSGKVNKQCKFYNTSKGCRNGSRCRFQHTSVWKM 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00690 349 MobiDBLite consensus disorder prediction 41 59 - -
Gma11g00690 349 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 1 345 - -
Gma11g00690 349 MobiDBLite consensus disorder prediction 230 302 - -
Gma11g00690 349 ProSiteProfiles Zinc finger C3H1-type profile. 318 346 IPR000571 GO:0046872
Gma11g00690 349 SUPERFAMILY CCCH zinc finger 324 346 IPR036855 GO:0046872
Gma11g00690 349 MobiDBLite consensus disorder prediction 276 299 - -
Gma11g00690 349 MobiDBLite consensus disorder prediction 122 169 - -
Gma11g00690 349 MobiDBLite consensus disorder prediction 230 265 - -
Gma11g00690 349 MobiDBLite consensus disorder prediction 41 62 - -
Gma11g00690 349 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 345 - -
Gma11g00690 349 MobiDBLite consensus disorder prediction 145 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00690 Gma-Chr11 5768351 5771550 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00690 75 147 Homeobox Transcription Factor Family AT4G02560 41.096 3.56e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gma11g00690 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00690 - - gsj:114373954 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00690 11 5768351 5771550 Gma11g00690 11 5768351 5771550 ECH
Gma11g00690 11 5768351 5771550 Gma02g00453 02 4556920 4564590 PCT