Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00689 ATGAAGCGTTCAAGGAAATTGAAGAAGGTTTCATGGGCTCCTGGATCTAATCTATGCCAGGTAAAATTGTTCTTATCTGAGGATCTCCCTTCAAAAGTTGGCGAGAAATTTCAAGATCATTTTCAAGCAAAGAAAATGTCAATAGGGTCTTCAGATGATTTTCCTCCTGGTTTTGAAGACAATCATTTGCGAAATCAATCAAAGGCTAAACTCTCTCACATCCCTCAGATTAAATGGGAATGCCCTTCTTTGTTCACTTTGAGTAATGATTGGCGCGTTGCAGCTGGTGAAGACAGTACGGAGACATGTGATCAGAAGTTAAGAGAAATGAGAGTGCCTGAAGCAATTTATCCTCGTATTTCTGCCATTCCTGATGGACCTTCTGAATCGGAGAAGGAATTTTATGATGATAATGAAAGCCTCATTCCTCTCATCCCTCTCATTCCTGTTGAGGAGGAAGAAGAGTCAGCAGAGGATATTGAACCTGACTCTTCCATCAAAAAATTGCATAAACAAAACTCTCAGCAGCAATATATACCACCGGCAATATCTCTTGTTAACCCAGAATGCAGCAATGTTAATTCACATTGCAGTGGAAAGCCATTAGGTGCAACATCTTCTGAGGCAGATATAATTGCAGCAGCTTCTTCTGCTGCTGTTGCTTCCATCATAAAAAGGAATGAGCAAGGAACCTTGATTGATATGGATTTGCTCGTTAAATTATTTACTGACCCAACAATGATTGAGAAATTAATTGAGCAAAATAGAACTGCTACCACCACTGTCAGTGTCAGTGCCCCCTCAAGTATTTTGAGTATACCAACTTCTTATTCTAAACCTGCAGCTGTAGCATCTGAGACTACACCAACAACCACAAGGCCATCAATTACATCTGTTCCATCTGTTTCATTGCCTAAGCCTGTACCTCCTCAAACAGTAACAAGGCATAAACCTCCATCAATACCTACACCTCATATGCACAGGCCTGTCAAGAAAAATATTCCCCATATGGCAAATAGAGTGCTTCCCTCTTTAAACACTCACTCTCCACAACAAGGGCTAAAGAGAGCAGCACCATCATTGGCTTCTGTTTCTTCCAGTGAATTGAAAACAGTGACAGTGTCTTCTGCTTCTGCAAACATGCATGCAGTTGAAAAACAGGTGCAGTCCACCACAACTGGTGCCGTTAAGGATGTCAATTATTACCTAAACCTGGTTAAAGAACATGGTACTCATAAGCAAGCTGGCAACAAGAGTCTTAAGAACTTACAAGGTTTGAAACCGTCACAGGGAGAAGTGAAATTCAAAAGTAAGAAACCATGCATATACTTTAGAACTAAAAGGGGTTGCCGTAATGGTTCTGACTGCCCTTATCAGCATGATATGTCAAATCGGGGGGAAGCTGGTAAAGTCCTAATGGCTCAACAAAATGCTAAAAGATTGAAAGTAGGACCAGAAATTAAGGGGAGGCTATATACTTAA 1482 0.4076 MKRSRKLKKVSWAPGSNLCQVKLFLSEDLPSKVGEKFQDHFQAKKMSIGSSDDFPPGFEDNHLRNQSKAKLSHIPQIKWECPSLFTLSNDWRVAAGEDSTETCDQKLREMRVPEAIYPRISAIPDGPSESEKEFYDDNESLIPLIPLIPVEEEEESAEDIEPDSSIKKLHKQNSQQQYIPPAISLVNPECSNVNSHCSGKPLGATSSEADIIAAASSAAVASIIKRNEQGTLIDMDLLVKLFTDPTMIEKLIEQNRTATTTVSVSAPSSILSIPTSYSKPAAVASETTPTTTRPSITSVPSVSLPKPVPPQTVTRHKPPSIPTPHMHRPVKKNIPHMANRVLPSLNTHSPQQGLKRAAPSLASVSSSELKTVTVSSASANMHAVEKQVQSTTTGAVKDVNYYLNLVKEHGTHKQAGNKSLKNLQGLKPSQGEVKFKSKKPCIYFRTKRGCRNGSDCPYQHDMSNRGEAGKVLMAQQNAKRLKVGPEIKGRLYT 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00689 493 MobiDBLite consensus disorder prediction 303 317 - -
Gma11g00689 493 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 1 483 - -
Gma11g00689 493 MobiDBLite consensus disorder prediction 282 302 - -
Gma11g00689 493 MobiDBLite consensus disorder prediction 282 329 - -
Gma11g00689 493 ProSiteProfiles Zinc finger C3H1-type profile. 435 463 IPR000571 GO:0046872
Gma11g00689 493 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00689 Gma-Chr11 5760207 5763425 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gma11g00689 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00689 - - gmx:102661234 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00453 02 4556920 4564590 Gma11g00689 11 5760207 5763425 PCT