Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00685 ATGGAGTCGATGGAGTCATGTGTCCCACCAGGGTTTCGGTTCCACCCAACAGATGAAGAGCTTGTTGGTTATTATCTCAGGAAGAAAGTCGCTTCTCAGAAAATTGACCTTGATGTTATCAGAGAGATCGATCTATATCGTATTGAACCATGGGATCTCCAAGAGAGATGCAGGATAGGGTATGAAGAGCAGAATGAGTGGTATTTCTTCAGCCACAAAGATAAAAAGTATCCAACAGGGACAAGAACTAATAGAGCTACCATGGCTGGGTTTTGGAAGGCGACAGGAAGAGACAAAGCAGTGTATGAAAGAGCAAAACTTATTGGGATGAGGAAGACCCTTGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAAAGTGATTGGATCATGCACGAGTATAGGCTTGAATCTGATGAGAATGGACCTCCACAGGAGGAAGGTTGGGTTGTGTGCAGAGCCTTCAAGAAGAAAACCACTGGGCAAACGAAGACTATAAATATTGAAGGATGGGAGTCAAGCTACTTCTATGACGAAGCAAGTGGGGCAACAAGCACTTTGGTCGATCCAATTGAACTCATTTCAAGGCAATCTCAGAGCTTTCTGGCTCAAAATTTCATGTGCAAGCAAGAGCTAGAAGCAGATAACTTGACTTGCATGCATCAAGATCCGTTTGTGCAACTTCCTCAGCTAGAAAGCCCGTCTTTGCCACTAGTAAAGAAGCCAAGCACAGTGTCCCTAGTATCAGACAATAATAACGAAGGTGAAGACAATCAAAACAGGTTGTTATTCAACAACAACAACACAAAGAAAGTCACTACTGATTGGAGAGCCCTTGACAAGTTTGTAGCCTCTCAACTAAGTCAAGAAGTAAACACGCATGAAACTAATGTTGGAGTACTCTCATCAAGCTTTGAACCCCATGATGATAACCACGACATGGCACTGCTGCTACTGCAGAGTAGTAGGGATGAAGGGAACAGGTTAAGCCCGTTTCTAAATACAAGCTCCGACTGTGACAATGGGATATGCGTATTCGAAAAATGA 1047 0.4336 MESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYERAKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKKTTGQTKTINIEGWESSYFYDEASGATSTLVDPIELISRQSQSFLAQNFMCKQELEADNLTCMHQDPFVQLPQLESPSLPLVKKPSTVSLVSDNNNEGEDNQNRLLFNNNNTKKVTTDWRALDKFVASQLSQEVNTHETNVGVLSSSFEPHDDNHDMALLLLQSSRDEGNRLSPFLNTSSDCDNGICVFEK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00685 348 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Gma11g00685 348 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 328 - -
Gma11g00685 348 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 4 328 - -
Gma11g00685 348 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Gma11g00685 348 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Gma11g00685 348 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00685 Gma-Chr11 5740021 5742465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00685 1 347 NAC Transcription Factor Family AT2G18060 63.934 3.42e-162 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma11g00685 NAM 7.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00685 - - gmx:100802758 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00685 11 5740021 5742465 Gma11g00685 11 5740021 5742465 ECH
Gma11g00685 11 5740021 5742465 Gma16g01217 16 29900547 29904038 PCT
Gma11g00685 11 5740021 5742465 Gma02g00456 02 4583994 4587136 PCT
Gma16g01217 16 29900547 29904038 Gma11g00685 11 5740021 5742465 PCT
Gma02g00456 02 4583994 4587136 Gma11g00685 11 5740021 5742465 PCT