Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00673 atggattggcaaagcatgatgggcaacctggacccattccaaagaaCAATCTTAATCCTCGTCCCACTAACACTACTCCTGCTGCTGTTACTATCTCGTACCCGTCCAAGACCGCCCTATCCACCAGGCCCTAAGGGCTTCCCAATCATAGGAAACATGTTTATGATGGACCAGCTAACCCACCGCGGTCTCGCCAACCTGGCCAAACACTACGGCGGAATCTTCCACCTTCGCATGGGCTTCCTCCACATGGTCGCCATCTCCGACCCCGATGCCGCGCGACAGGTTCTCCAAGTCCAAGACAACATCTTTTCCAACCGCCCCGCCACCATCGCCATCAGCTACCTCACCTACGACCGCGCCGACATGGCCTTCGCCCACTAcggccccttctggcgccagatgaggaaactctgcgtcatgaagctcttcagccgcaagcgcgccgagtcctggcagtccgttcgcgacgaggtcgactccgccgtccgcgccgtcgccaacagcgtcggaaaacccgtcaacatcggagaattagtgtttaacctcaccaagaacatcatctaccgcgccgcgttcgggtcgagttcgcaggaaggtcaagacgatttcattaaaatattgcaggagttctctaagctctttggcgcgtttaatattgcggattttataccctacctcgggcgcgtagatccacaaggtttgaactccagactcgctagggcacgtggcgcgctcgatagcttcattgataagatcatcgacgagcacgtgcagaagaagaataattatcagagcagtgaaattggtgatggtgaaacggacatggtggatgagttgctggcgttctacggcgaggaggcgaagttgaacaatgaatcggacgataatttgcagaactctatcagactcactaaggataacatcaaggctatcattatgGACGTGATGTTCGGAGGCACGGAAACGGTGGCGTCAGCAATCGAGTGGGTCATGTCGGAGCTGATGAGAAGCCCAGAAGACCAAAAGCGGGTCCAACAAGAGCTGGCGGATGTAGTGGGCCTGGACCGTCGGGTCGAAGAGTCCGATTTCGAGAAACTCACTTATCTCAAATGTGCCCTCAAAGAGACCCTCCGCCTCCACCCTCCGATACCGCTCCTCCTCCACGAGACGGCGGAGGACGCCACCGTCGGCGGCTACTTCGTCCCCAGGAAGGCGCGTGTTATGATCAACGCGTGGGCCATTGGGAGGGACAAGAATTCCTGGGAGGAACCCGAAACTTTTAAGCCCGCCCGGTTCCTTAAACCGGGCGTGCCCGATTTCAAGGGGAGCAACTTCGAGTTCATTCCATTCGGGTCGGGTCGAAGATCCTGCCCCGGAATGGTGTTGGGGCTCTACGCGCTTGAATTGGCGGTGGCTCATCTTCTTCACTGCTTCACGTGGGAATTGCCAGATGGAATGAAACCAAGTGAGATGGACATGGGTGACGTGTTCGGACTCACCGCTCCAAGGTCCACGCGACTCATTGCTGTACCAACCAAGCGCGTGGTGTGCCCTCTCTTTTAA 1566 0.3525 MDWQSMMGNLDPFQRTILILVPLTLLLLLLLSRTRPRPPYPPGPKGFPIIGNMFMMDQLTHRGLANLAKHYGGIFHLRMGFLHMVAISDPDAARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDSAVRAVANSVGKPVNIGELVFNLTKNIIYRAAFGSSSQEGQDDFIKILQEFSKLFGAFNIADFIPYLGRVDPQGLNSRLARARGALDSFIDKIIDEHVQKKNNYQSSEIGDGETDMVDELLAFYGEEAKLNNESDDNLQNSIRLTKDNIKAIIMDVMFGGTETVASAIEWVMSELMRSPEDQKRVQQELADVVGLDRRVEESDFEKLTYLKCALKETLRLHPPIPLLLHETAEDATVGGYFVPRKARVMINAWAIGRDKNSWEEPETFKPARFLKPGVPDFKGSNFEFIPFGSGRRSCPGMVLGLYALELAVAHLLHCFTWELPDGMKPSEMDMGDVFGLTAPRSTRLIAVPTKRVVCPLF 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00673 521 PANTHER CYTOCHROME P450 84A1-RELATED 1 521 - -
Gma11g00673 521 Gene3D Cytochrome P450 34 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma11g00673 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Gma11g00673 521 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma11g00673 521 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma11g00673 521 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma11g00673 521 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma11g00673 521 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma11g00673 521 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma11g00673 521 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma11g00673 521 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma11g00673 521 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma11g00673 521 SUPERFAMILY Cytochrome P450 41 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma11g00673 521 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 1 521 - -
Gma11g00673 521 Pfam Cytochrome P450 41 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma11g00673 521 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma11g00673 521 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma11g00673 521 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00673 Gma-Chr11 5621615 5624755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00673 47 520 Monolignol Biosynthesis Gene Families AT4G36220 76.632 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00673 K09755 - gmx:100793538 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00673 11 5621615 5624755 Gma01g01728 01 52955648 52958447 ECH
Gma11g00673 11 5621615 5624755 Gma11g00673 11 5621615 5624755 ECH
Gma16g01226 16 30112464 30117789 Gma11g00673 11 5621615 5624755 PCT