Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00655 ATGTTTTCCACAAGAGACATGCCTTCCCCATCCTCAATTTTCTCAGCCTACGCCTCCATGACAGCTTCCATCATGCTTCTGCGTTCCATGGCCAACGAACTCGTTCCCCAACCCATTCGCGGCTACCTTTACAACACGTTCGGTTACCTCATAAGGCCTCGTTCCCAAACCCTCACCCTCATCATCGAAGAGTCCACCGGCATAGCCCGTAACCAAGTCTACGACTCCGCGGAGGCCTACCTCTCCACACGTGTCAGCCCCGAAAACGAGAGACTCAAGATCAGCAAGAGCGCAAAAGAGAAGAAACTAACCGTTCGGTTGGAGAAGGGCGAGAAGGTAGTCGACTGCTTCAACGGCGCGTGCTTCAAATGGAGATTCATCTGCGCTGAGTCCGAGAAGAACAACCCCAACGATCATAGCAACAACAGCATCTCCGTACGGTCCGAAAAACGGTCTTTTGAGCTGAGCTTCCCGAAGAAGTACAAGGAAATGGTTTTGGACTCTTACCTGCCCTTCATTCTCGACAAGGCCAGGGAGATGAAGGACGAGGAAAGGGTCTTAAAGATGCACACTCTCAACACCTCCTACTGTTACAGTGGagtcaaatgggactccattaatctggagcatccctcaacttttgagacgctggcgatggagccggagctgaagaatgcggtgatagaggacttggataggttcgtgaagaggaaggagttttataagagggttgggagggcgtggaaacgtggctacttgctgtatgggcctcctggtactggaaaatctagcttgatcgctgctatggcgaattacttgaagtttgacgtctttgacctcgaacttgggagcatagtgagagattctgacctcaggaagctgcttctggcgactgcgaataggtccattttggtcattgaagacattgattgcagtgtggatctgccagagCGTCGGCATGGGGATCATGGACGTAAACAAGCTGACGTGCAGttgaccttgtctggattactgaacttcatagatgggctatggtctagttgtggagacgagagaatcatcatattcaccaccaaccacaaggagaggctagacccagcactgttgaggccaggaagaatggacatgcacattcacatgtcctattgctcctaccaaggcttcaagattttggcctcaaactacttagaAACTTCCTCTGACCACCCCCTCTTTGGAGAGGTAGAGGGGCTAATAGAGGACATACAGATAACCCCTGCGCAAGTGGCAGAGGAACTGATGAAGAACGAAGACCCTGAGGCCACACTTGAAGGATTCGTGAAGCTACTTAAGAGGAAGAAGATGGAAGGTGATGTGTGTGAAAACTCTACTCCTGATAAAGCAGAACCTACTCGTCAGCAATCTAAAAGGCGCAAGGTTGGTTGCAAGCAAAAACGAGGCAAGAACACACTGGGCTTGAATGTTGAGTTGAAGCAAGTCATCGTTGATGATTTGGAACGCTTCTTGAGGAGGAAGGAACTTTACAAGAAAGTGGGCAATCCTTGGAAACGTGCCTCTCCGAACAGGAAAATCAAGCCTCCTAGCAGCAATGAACTCTTCGTAGCCGCCCAGGAGTACCTTTCCGccaagattacaagattactcaacacgtgtttggataagacactcgcgtcgtggactgtcttcgcagtcaagaaccaacgcggcaagatctacgacctcacgcatctggcggccagcactgcgaggTGCCGCACCACGGCAGGGTCCGGCGGAGGGCCAATTCGGCAGTGGCAGGTTCCGGCAAAGTCACTGGTCTTAATCAACAGCATCGCCCTGTCCACCACAGACAAAGGACTAAAGTTAACATCAATAACGTTTCTTCCACCATTGGACATGTATTCGACGACGAGTAATTTGTTGTCGTTTGGGTCGGTGCTGAAGCCGATGAGGTTGACGAGGCAGGGGCTGGGGATTTGGGAGAGAATCTTGATCTCGTTTTTGGCGGGGACTGGTGCAGTTGCCGCAGTGGGTGCATTTGGTGGCGTGGTTTTTAGAGGTGCTGGTGACGACAAGTTTGGTCGTTCTGACAGCGGCGAGGAGCTTGTCGACGTCCAGGGTGACTCTTTAGACTCTGTCGTGGCTGCCTCTGCCTAG 2157 0.3556 MFSTRDMPSPSSIFSAYASMTASIMLLRSMANELVPQPIRGYLYNTFGYLIRPRSQTLTLIIEESTGIARNQVYDSAEAYLSTRVSPENERLKISKSAKEKKLTVRLEKGEKVVDCFNGACFKWRFICAESEKNNPNDHSNNSISVRSEKRSFELSFPKKYKEMVLDSYLPFILDKAREMKDEERVLKMHTLNTSYCYSGVKWDSINLEHPSTFETLAMEPELKNAVIEDLDRFVKRKEFYKRVGRAWKRGYLLYGPPGTGKSSLIAAMANYLKFDVFDLELGSIVRDSDLRKLLLATANRSILVIEDIDCSVDLPERRHGDHGRKQADVQLTLSGLLNFIDGLWSSCGDERIIIFTTNHKERLDPALLRPGRMDMHIHMSYCSYQGFKILASNYLETSSDHPLFGEVEGLIEDIQITPAQVAEELMKNEDPEATLEGFVKLLKRKKMEGDVCENSTPDKAEPTRQQSKRRKVGCKQKRGKNTLGLNVELKQVIVDDLERFLRRKELYKKVGNPWKRASPNRKIKPPSSNELFVAAQEYLSAKITRLLNTCLDKTLASWTVFAVKNQRGKIYDLTHLAASTARCRTTAGSGGGPIRQWQVPAKSLVLINSIALSTTDKGLKLTSITFLPPLDMYSTTSNLLSFGSVLKPMRLTRQGLGIWERILISFLAGTGAVAAVGAFGGVVFRGAGDDKFGRSDSGEELVDVQGDSLDSVVAASA 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00655 718 ProSitePatterns AAA-protein family signature. 352 370 IPR003960 GO:0005524|GO:0016887
Gma11g00655 718 SMART AAA_5 248 384 IPR003593 -
Gma11g00655 718 PANTHER BCS1 AAA-TYPE ATPASE 6 464 - -
Gma11g00655 718 PANTHER BCS1 AAA-TYPE ATPASE 482 518 - -
Gma11g00655 718 PANTHER BNAA10G17020D PROTEIN 482 518 - -
Gma11g00655 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 430 IPR027417 -
Gma11g00655 718 Gene3D - 379 450 - -
Gma11g00655 718 Gene3D - 201 378 IPR027417 -
Gma11g00655 718 MobiDBLite consensus disorder prediction 451 469 - -
Gma11g00655 718 Pfam Domain associated at C-terminal with AAA 35 127 IPR025753 -
Gma11g00655 718 Pfam ATPase family associated with various cellular activities (AAA) 253 381 IPR003959 GO:0005524|GO:0016887
Gma11g00655 718 MobiDBLite consensus disorder prediction 451 472 - -
Gma11g00655 718 PANTHER BNAA10G17020D PROTEIN 6 464 - -
Gma11g00655 718 CDD AAA 237 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00655 Gma-Chr11 5423826 5429853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00655 226 380 Calmodulin-binding Proteins AT3G56690 28.834 3.14e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00655 - - gmx:100785070 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00655 11 5423826 5429853 Gma01g01749 01 53163339 53167064 ECH
Gma11g00655 11 5423826 5429853 Gma11g00655 11 5423826 5429853 ECH