Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00641 ATGAGGGTGTTGTCGTTGAGCCCCTCCACTTTGGCTTTGGGTCGCCACTTTCTCTGCAAAACCACCTCACACTCCCACCCTTCCCTTTCCCTCCCACGCGCCGCTTCCATCTCCGCCACTCTCACGCGCCCACCCATTCCTCCCAATTCAGATCCCCGCAGGTTCCCCTTCTCCTCCCTCACCTCTTCCACCAACACTCCCAACAACAATCCCTTTCTCTCTCACTCCCAAGGTGCTGGTGCTGGTGCTGGCACGTTCCTTTGGAACCCCGCTTCCGACACCCCTTACGCCGCGCTCCACGGAGGCAAAGACCGCGTCgccacggtggtgctgttggggtggcttggagcgaggaccaagcacctcaagaggtacgtcgagtggtacaATTCGCGCGGCATTAACGCACTCACCTTCGTCGTCGACATCAAGGAGCTGCTTCGATTTGACCTCGGCCACGTGCTCGAGACCCGAATCTCTCTCCTCGCCGACCACCTCGTTTCTTGGGTGTCCCGCGAGGAACACGATGGGAGGGAACGCTGCCTGGTTTTTCACACTTTCAGCAACACGGGTTGGTTTGTTTATGGTTACATTCTTGCCCGAATGCTGGGAAGTGAGGAGCTCATGGAGAAGATTAAAGGATGCATTGTGGATTCGGGAGGAGGAGAACCTTTCAATCCTCAGGTCTGGGCTGCCGGTTTTTCTGCTGCTATATTGAAGAAGCGCATCTCTTTAGGACCCATAGTCGAGGTAGAAGGCAAGCTTAAATCGGAGACAGAAGTCAGCTTGCCAAAGATTGAACAAAAGGAATCTTCGACAATCGAAACTTTGGTCTTGTCACTATTAGAGAAGTTCTTCTCATTTGTTTTGCAGTTGCCAGATGTGAACCAGAGGTTAACAAGGATTGTCAATGTGCTCATGAAACACCAACCTTGTCCTCAGCTTTACCTGTATAGTACAGCTGACAAAGTAGTTCCATATCAATCCATAGAAACGTTAATTGAGGAGCAGAGGAAGATGGGAAAGAGGGTAAGGTCCTTTAACTTCGGCTTATCTCCCCACGTGGATCATTATAGGACATTTCCGGACCTATACTTATCACAGGTGATGACTTCAGTTTCTAACCGCATGTTTGTTTCAGCATCTCTGATTAATGCAAAAACCTCTCTCGAACCACATCATTTGGAGCATTTTAAACTTGCGTCCATTGAGAAATTGACTCATTTCTTGAATTTGTCCAAAAGGATGAATGATTTGATGACAAAGTCGTTCCTAAGTTATGTGGAACTGAAGAAACAGGCTCGGAAGGACCTTGAAGACGACGATCTTGACATTGAAGCAGGGAAACTCAACCCCACGGAAGACCGCAGCCTCTCTCAGTTCTTCCAAGAAGTTGAAGCAATCAAGTTTGAAATGGAAGAGATCACCAATCTCTTATTTGATCTTCAGCAACTGAATGAAGAGACAAAGTGCACCCACGGTGCCAAAGTTCTCCGCGGCCTAAGGGACAGGATGGAGTCAGACATGGTTGCCGTGCTTCGCAAGGCACTGATCATCAAGGCAATGCTCGAGGTTCTTGACCAATCCAACATAGACAATCGTAGTTTGTCAGAATCCTACAAAGAAGGGAGCCCCATTGACAGGACCAGAATGTCTGTCACAAATGGTTTGAGGGTCAAGCTTAGGGACATGATGAATGACTTTCAGTCCTTGAGGGACAAGATTCTATCTGAACACAAGGAAGATTTGAAGAGAAGGTACTATACCACGACCGGTGAGGTTCCTACTGAAGAGGTGATGGAGAAGATGGTTTCTGGGAGTCTTAAAGTTGAGTTTTTGGCTGGAAAAACGGATGCTGATTTGGGCACTCAGGTTAGGCACGAGGCATTGATGGATATCCAGAGGAGTTTGAATAAGCTTCACCAGGTTTTTCTTGATATGGCTATTCTGGTTGAGACACAGGGTGAAAAGTTGGATAACATTGAGGATAATGTGGTTAATGCTGGTAACTTCATCCATGGTGGGACTAATAGTCTTTACAATGCCAACCAGATGAAGAAGAAGAACAGAAAGTGGTTGTGTTGGGTTTTTGCTGTGGGGCTGATCATACTACTCGTATGCATCGTTGCAATGTTGTCTTCTTGA 2145 0.4592 MRVLSLSPSTLALGRHFLCKTTSHSHPSLSLPRAASISATLTRPPIPPNSDPRRFPFSSLTSSTNTPNNNPFLSHSQGAGAGAGTFLWNPASDTPYAALHGGKDRVATVVLLGWLGARTKHLKRYVEWYNSRGINALTFVVDIKELLRFDLGHVLETRISLLADHLVSWVSREEHDGRERCLVFHTFSNTGWFVYGYILARMLGSEELMEKIKGCIVDSGGGEPFNPQVWAAGFSAAILKKRISLGPIVEVEGKLKSETEVSLPKIEQKESSTIETLVLSLLEKFFSFVLQLPDVNQRLTRIVNVLMKHQPCPQLYLYSTADKVVPYQSIETLIEEQRKMGKRVRSFNFGLSPHVDHYRTFPDLYLSQVMTSVSNRMFVSASLINAKTSLEPHHLEHFKLASIEKLTHFLNLSKRMNDLMTKSFLSYVELKKQARKDLEDDDLDIEAGKLNPTEDRSLSQFFQEVEAIKFEMEEITNLLFDLQQLNEETKCTHGAKVLRGLRDRMESDMVAVLRKALIIKAMLEVLDQSNIDNRSLSESYKEGSPIDRTRMSVTNGLRVKLRDMMNDFQSLRDKILSEHKEDLKRRYYTTTGEVPTEEVMEKMVSGSLKVEFLAGKTDADLGTQVRHEALMDIQRSLNKLHQVFLDMAILVETQGEKLDNIEDNVVNAGNFIHGGTNSLYNANQMKKKNRKWLCWVFAVGLIILLVCIVAMLSS 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00641 714 PANTHER UNCHARACTERIZED 42 371 IPR008547 -
Gma11g00641 714 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 620 682 IPR000727 -
Gma11g00641 714 Coils Coil 468 488 - -
Gma11g00641 714 CDD SynN 458 608 IPR006011 GO:0016020
Gma11g00641 714 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 42 371 - -
Gma11g00641 714 SUPERFAMILY t-snare proteins 456 675 IPR010989 GO:0016020|GO:0016192
Gma11g00641 714 Pfam SNARE domain 657 706 IPR000727 -
Gma11g00641 714 SMART SynN_4 453 580 IPR006011 GO:0016020
Gma11g00641 714 MobiDBLite consensus disorder prediction 54 75 - -
Gma11g00641 714 SUPERFAMILY alpha/beta-Hydrolases 95 366 IPR029058 -
Gma11g00641 714 SMART tSNARE_6 615 682 IPR000727 -
Gma11g00641 714 Gene3D - 617 713 - -
Gma11g00641 714 CDD SNARE_syntaxin1-like 624 679 - -
Gma11g00641 714 Gene3D alpha/beta hydrolase 94 443 IPR029058 -
Gma11g00641 714 Pfam Eukaryotic protein of unknown function (DUF829) 108 371 IPR008547 -
Gma11g00641 714 Pfam Syntaxin 460 655 IPR006011 GO:0016020
Gma11g00641 714 MobiDBLite consensus disorder prediction 40 75 - -
Gma11g00641 714 Gene3D - 453 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00641 Gma-Chr11 5330842 5338828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00641 416 714 SNARE and Associated Proteins AT2G18260 58.442 6.26e-122 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00641 K08486 - gmx:100794267 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00641 11 5330842 5338828 Gma11g00641 11 5330842 5338828 ECH