Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00632 ATGGCAATGAGAGGGCAACAAGATAAGGAAATAGAGATACCAACCACAACCACTTTAGGTTACAACCTTCCCAACCGAGATTCTTCTTCTTCCTCTTCCAAGCTCTCTTCTCCAACTGTTGGTGAAAGAAGTAGCAGTGATCATGATCAACAGCATCATCAACCAACTCATCAAACTCGCACATTAATCTTCAACGAAACACCTCACCATAATCTCTATCCACCACCACCACCTCCTCCTCCTGCTCTTGCACCTCATCGACCCACGTCAGATCCAGATCTAAGCACCCCAATTGCTCCCACATCGAATCCCTCAAGAACAGCGCCGCCTCAAACGACAACAACAACAACCTCGACGCCGTCGATCAGGTACCGAGAATGTCTTCGGAACCACGCGGCGAGCATGGGGAGCCACGTGGTGGATGGCTGCGGCGAGTTCATGGCAAGTGGGGAAGAAGGCACGCCAGAATCACTAAGATGCGCAGCATGCGAGTGCCACCGCAACTTCCACAGAAAAGAAGTTGAAGGAGAATTACGACCGCAACCACAACCACAACCGCAAACACATGTTCCAAATTACCACAGCTACTACACCAACAAGCACAACGGTCACCTTCACTACCCTACACCCTCTTCATCTTCCCTCCATCATAGATTGGTTACACCAACAAGCTTGGTCTCCCCAGTGATGATGGCCTTTGGGGGCCCAGCTGAGTCATCAAGTGAAGATCTCAACATGTTTCAGTCCAACACTGGAGGAGCACAGTTAATATCAGTGCAGCAGCATGCACCACTACTCTCTtccagcaagaagaggtttttaaggtttggatgcacaataacaagcaaacaactagtagtaagaagcAGCAAATCTAGCAATTTTCACCCTTGGGGCAAGACTCTAGAGAGAGAGAGAGAAACAAAAAAAGAAAAGAAAAGGAGAGAGATGAGGATGACTTTTGGTCGTTGTGATGAACTGGGATATTGGTGTACGTTGTTTGTGATGAGGAGAAGGATCCCACACTCAACGAGTCATGACCCAATTAACCACAATTTTGTCCTCTCATAG 1071 0.4538 MAMRGQQDKEIEIPTTTTLGYNLPNRDSSSSSSKLSSPTVGERSSSDHDQQHHQPTHQTRTLIFNETPHHNLYPPPPPPPPALAPHRPTSDPDLSTPIAPTSNPSRTAPPQTTTTTTSTPSIRYRECLRNHAASMGSHVVDGCGEFMASGEEGTPESLRCAACECHRNFHRKEVEGELRPQPQPQPQTHVPNYHSYYTNKHNGHLHYPTPSSSSLHHRLVTPTSLVSPVMMAFGGPAESSSEDLNMFQSNTGGAQLISVQQHAPLLSSSKKRFLRFGCTITSKQLVVRSSKSSNFHPWGKTLERERETKKEKKRREMRMTFGRCDELGYWCTLFVMRRRIPHSTSHDPINHNFVLS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00632 356 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 124 173 IPR006456 -
Gma11g00632 356 MobiDBLite consensus disorder prediction 70 87 - -
Gma11g00632 356 Pfam ZF-HD protein dimerisation region 122 174 IPR006456 -
Gma11g00632 356 MobiDBLite consensus disorder prediction 10 44 - -
Gma11g00632 356 MobiDBLite consensus disorder prediction 94 119 - -
Gma11g00632 356 MobiDBLite consensus disorder prediction 176 195 - -
Gma11g00632 356 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 51 275 - -
Gma11g00632 356 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 7 51 275 - -
Gma11g00632 356 MobiDBLite consensus disorder prediction 1 119 - -
Gma11g00632 356 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 123 174 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00632 Gma-Chr11 5258660 5260349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00632 95 273 ZF-HD Transcription Factor Family AT2G18350 44.809 2.52e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Gma11g00632 ZF-HD_dimer 1.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00632 - - gmx:100776691 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01778 01 53404740 53405693 Gma11g00632 11 5258660 5260349 GST
Gma11g00632 11 5258660 5260349 Gma16g01270 16 31155442 31156395 PCT
Gma11g00632 11 5258660 5260349 Gma02g00509 02 5067770 5073331 PCT
Gma16g01270 16 31155442 31156395 Gma11g00632 11 5258660 5260349 PCT
Gma02g00509 02 5067770 5073331 Gma11g00632 11 5258660 5260349 PCT