Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00598 ATGAGAGTTCCCGTTCCCTCATCCCCACAGGCCAACCCAAAACCCACCAATAACGTAGTCCGTACCATTGCCCTTCCCAACCTCAACACCACCACCACCACCACCACCACGAGCTTGTGCTACGAGCCCACTTCTGTCCTCGACCTGTGCCGGAGCCCGAGCCCGAGCCCGGGCACCGAAAAGCCCACCAACGATCACGCCGTTCTCGACCTGGACGACCATGCGTTGCACAACTTGGACTGGGACTCCATCATGAAGGACTTGGGCTTACACGACGACTCCGCCACCCCCGTATTGAAAACTTTTCTCCACCCCGACGACGACAACAACAACCCATCATGCGACGACTTCACACCCTTCGACCACGCGCTTGAATTCACCTCTCTCTCCGACATCTACTCCAACCAAAACCTCGCCTTCGATTTCAACCACTTGCCTCACGACTTCAACCACCACCTCAATGGCTTCGATTTCATCGAAGAGCTCATCCGCGCCGCCGACTGCTTCGACACCAAACAGTTACACGTGGCGCAGGTGATATTGGAGCGGCTCAATCAAAGGCTACGATCTCCTGTGGGAAAACCCCTCCAGCGCGCAGCGTTTTACTTCAAAGAAGCTCTCCAGAGTCTTCTCTCCGGTTCGAACCGGACCCCGAGGATTTCGTCCCTGGTGGAAATCGTGCACAGTATCAGAACCTTCAAGGCCTTTTCGGGAATTTCGCCGATCCCAATGTTCTCTATCTTCACCACCAATCAAATAGTTCTGGATCACGCTGCGTGCTCCTTCATGCACGTCATCGACTTCGATATAGGTCTTGGGATCCAATACGCTTCTCTCATGAAGGAGATTGCGGAGAAGGCGGCGGAGTCGCCGGTGCTCCGAATCACTGCCGTCGTTCCGGAAGAATACGCCGTCGAGAGCACGCTCGTCCACGACAACCTCGCGCAGTTCGCTCTCGAACTCAGGATCCGAGTGCAGGTCGAGTTCGTGGCGCTTCGAACCTTCGAGAATCTCTCCTTCAAGTCCGTGAAGTTCGTCGACGGCGAGAATACCACCGTGCTCTTGTCGCCGGCGATTTTTGGCCACCTCGGCAACGCCGCCGCGTTCCTGGCGGACGTGCGGAGGATCTCGCCGAGCATGGTGGTTTTCGTGGACGGTGAGGGATGGGCGGAGACTGCCACGGCATCGGCGGCGTCGTTCCGGCGTGGCGTTGTGAGCAGTTTGGAGTACTACTCGATGATGCTGGAGTCGCTTGACGCGTCGACGGTGGGAGGAGGAGGGGAGTGGGTGAGGAGAATCGAGATGATGCAACTGGGGCCGAAGATTTTGGCGGCGGTGGAAAGCGCCTGGCGGAAGTTGCCGCCGTGGAGGGAGGCGTTTTATGGCGCCGGAATGAGGCCGGTGCAGTTAAGCCAGTTTGCGGATTTTCAAGCGGAGTGCTTGTTAGCGAAGTCACAAATCAGAGGCTTCCACGTGGCAAGACGTCAGAACGAACTGGTGCTTTTCTGGCATGATAGGGCCATGGTTGCCACGTCAGCATGGCGCTGTTAG 1551 0.5725 MRVPVPSSPQANPKPTNNVVRTIALPNLNTTTTTTTTSLCYEPTSVLDLCRSPSPSPGTEKPTNDHAVLDLDDHALHNLDWDSIMKDLGLHDDSATPVLKTFLHPDDDNNNPSCDDFTPFDHALEFTSLSDIYSNQNLAFDFNHLPHDFNHHLNGFDFIEELIRAADCFDTKQLHVAQVILERLNQRLRSPVGKPLQRAAFYFKEALQSLLSGSNRTPRISSLVEIVHSIRTFKAFSGISPIPMFSIFTTNQIVLDHAACSFMHVIDFDIGLGIQYASLMKEIAEKAAESPVLRITAVVPEEYAVESTLVHDNLAQFALELRIRVQVEFVALRTFENLSFKSVKFVDGENTTVLLSPAIFGHLGNAAAFLADVRRISPSMVVFVDGEGWAETATASAASFRRGVVSSLEYYSMMLESLDASTVGGGGEWVRRIEMMQLGPKILAAVESAWRKLPPWREAFYGAGMRPVQLSQFADFQAECLLAKSQIRGFHVARRQNELVLFWHDRAMVATSAWRC 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00598 516 ProSiteProfiles GRAS family profile. 149 515 IPR005202 -
Gma11g00598 516 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 515 IPR005202 -
Gma11g00598 516 Pfam GRAS domain family 159 515 IPR005202 -
Gma11g00598 516 PANTHER SCARECROW-LIKE PROTEIN 15 6 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00598 Gma-Chr11 5008427 5009977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00598 69 515 GRAS Transcription Factor Family AT4G36710 55.626 3.68e-167 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g00598 GRAS 3.9e-81 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00598 - - gmx:100784206 1011.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00598 11 5008427 5009977 Gma11g00598 11 5008427 5009977 ECH
Gma01g01806 01 53671240 53673178 Gma11g00598 11 5008427 5009977 GST
Gma11g00598 11 5008427 5009977 Gma16g01293 16 31536381 31538343 PCT
Gma11g00598 11 5008427 5009977 Gma02g00533 02 5297777 5299806 PCT
Gma16g01293 16 31536381 31538343 Gma11g00598 11 5008427 5009977 PCT
Gma02g00533 02 5297777 5299806 Gma11g00598 11 5008427 5009977 PCT