Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00583 ATGGCGTTCAGGAAAGCTCTCGCTCAAGGACTCCTTAACATCACCAAAGTGTCATCACAATCCCTCACCAATTGTCGGATTTCCTCTTCCTCCGTCATCGGAAAAGTTTCCCCACGCGCCGCCGAGCCCGTTGATCCCGGAGAAAATGGCCGCTTCCGTTCGCCGCAACTCGCCGGAAGAAACCTCCTCGACAAGCTCAGGACGATGGGTGTTGCCCACAACCGGATCCGGTTGGATGGGTTGACGCCGCCGCAGATTAAAATGGTGGACACAGTGACCATCGAGGATGCCAGAAAATTGCTAAAGGTGGCGCAGGTGGAAATGTTGAAAGCGAAACTAAGACAGACCCGAAAGAGTTGCATAACGTTCTCGGAGTTCATTGCGATCTGCGCTGAGCATTGTTCGGATCAGGATCAAGCGGTGGAGATTGCAAAGATGTTGGATGATTCTGCGGCTGTGATTGTGTTGGGAGATGTCGTGTTTCTCAGACCCGAACAGGTAGCGAAAGCCATCCAAGGTCTTCTCCCTGTACCAGGAGCCAAGGTTCCCGAGTCAATAAGAAGAGAATTCGAAGAAATGGAGAAAAAGAGGTTAGCCATTGACGAGAGAGCAGACACCATGGTTCGGCGTGAGCTCTGGGGAGGGTTGGGTTTTATGATGGTGCAAACAATGGCATTCATGAGGCTTACATTTTGGGAACTCTCCTGGGATGTGATGGAACCCATATGTTTCTATTTGACCTCAATGTACTGCATGGCTTGCTACACCTTCTTCCTAAGGACCTCAAAAGAACCTTCCTTTGAAGGCTTCTACCAAGCCCGTTTCAGCTCCAAGCAGAAGCGACTCATGAAGCTTCACAATTTTGACATTGAAAAGTATAATCAACTCAGGGCTGCTTGCTCTCCCACCACCATGCCTCCTAAGTTTGATCCCTCCATGGCTCTCCCATTTGACAATTCTTCCATTCATCAATGA 975 0.4974 MAFRKALAQGLLNITKVSSQSLTNCRISSSSVIGKVSPRAAEPVDPGENGRFRSPQLAGRNLLDKLRTMGVAHNRIRLDGLTPPQIKMVDTVTIEDARKLLKVAQVEMLKAKLRQTRKSCITFSEFIAICAEHCSDQDQAVEIAKMLDDSAAVIVLGDVVFLRPEQVAKAIQGLLPVPGAKVPESIRREFEEMEKKRLAIDERADTMVRRELWGGLGFMMVQTMAFMRLTFWELSWDVMEPICFYLTSMYCMACYTFFLRTSKEPSFEGFYQARFSSKQKRLMKLHNFDIEKYNQLRAACSPTTMPPKFDPSMALPFDNSSIHQ 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00583 324 Coils Coil 94 114 - -
Gma11g00583 324 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 314 - -
Gma11g00583 324 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 1 314 IPR039055 GO:0051560
Gma11g00583 324 Pfam Mitochondrial calcium uniporter 137 296 IPR006769 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00583 Gma-Chr11 4885816 4888448 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00583 K20858 - gmx:100815180 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00583 11 4885816 4888448 Gma11g00583 11 4885816 4888448 ECH
Gma11g00583 11 4885816 4888448 Gma01g01818 01 53771257 53778192 ECH