Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00578 ATGCATCTCTTTCCCTTCATCCCCATAATCATTTTCACACTATTGATCCACAACTTCTCTCTGATTCTGGGGCAGCAACCTTATATTGGTTTAGGCACAGTAGCGTGTCCAAGAAGGGGTAACAAAAATTCTATCCGAGGTTACACTTGCAATGGTGCAAACCATAGCTGCCAAAGTTACCTCACCTTCAGATCTCAACCCATTTACAACTCTGTCAAGACAATATCAACTTTGTTGGGTTCTGACCCATCCCAGCTTGCTAAAATAAACTCAGTTTCCATGAATGACACCTTTGAGACAAACAAGTTGGTGATTGTTCCGGTCAACTGTTCCTGTTCAGGTGAGTATTATCAAACAAACACATCCTATGTGTTCCAGAATTCAGAAACTTACTTGTTGATTGCTAACAACACTTTTGAGGGCCTCACAACATGTCAAGCTTTGGAGAACCAAAACCACAACCCTGCAAACATATACCCCGGTAGAAGACTTTTAGTGCCTCTCAGATGTGCTTGTCCCACAAAGAACCAAACCAAGAAAGGCATCAGGTACCTCTTGAGTTACTTGGTGAACTGGGGTGATTCTGTTTCATTCATTAGTGAGAAATTTGGTGTCAACTTTATGTCTACTCTTGAAGCTAATACCCTTACTCTCACACAAGCCATGATCTATCCCTTTACGACAATTTTAGTTCCCCTTCATGACAAGCCCTCAAGTTCTCAAACCGTTTCGCCAACTCAACGCATTAGTCCACCACCCTCACCTCCCTCTTCTGATCATAGCTCAAACAAAACATGGGTGTATGTAGTTGTTGGGGTTGTTGTGGGAGCTATTGCCTTAACATCGGTTCTCTGTGCTGTCATTTTCTTCAAACGCTATCGCAAAAATAGAAACAAAGATGACTCATTGGTGGCAGTGCCTAAGAGTTTTGAGGCAATTGAGGAAAAACCTCAAGTGAAAGTGAATGAAAAATTGTCAGAGAACATATCTGGCATAGCTCAGTCTTTCAAAGTGTATAACTTTGAGGAACTACAGCGTGCAACAGATAACTTTAGTCCTAGCAGCTGGATCAAAGGGTCTGTTTATCGCGGTGTGATTAATGGTGATTTGGCTGCAATTAAAAAGATAGAAGGAGATGTGTCAAAAGAGATAGAGATACTGAACAAAATCAACCATACCAACGTTATACGCCTTTCTGGAGTTAGCTTCCATGAGGGTCGTTGGTACCTTGTTTATGTGTATGCTACTAATGGGGACTTGAGTGAATGGATCTACTTCAACAACGTGGACGGGAAGTTTTTGAGTTGGACTCAAAGAATGCAAATTGCATTGGATGTGGCAACAGGACTTGACTATCTTCACAGTTTCACTTCTCCTCCTCACATCCACAAGGATATTAACAGCAGTAACATTCTTCTGGATGGTGATTTCAGGGGAAAGGTCGCGAATTTAAGCCTTGCTAGGTGTTTGGAAGGAGGGGATGATCAATTTCCCACGACGAGGCACATTGTTGGGACAAGAGGCTACATGGCTCCAGAGTATTTGGAAAATGGTCTTGTGTCCACAAAGCTTGACGTATATGCATTTGGGGTACTGATGCTGGAAATGGTCACTGGAAAAGAGGTCGCTGCTATTTTAACTGAAGATGAGACAAAATTGTCACATGTTTTAAGTGGCATACCTGGTGAGAGAAGTGGCAAGGAGTGGTTGAAGGAGTTTGTGGATCCCTCTTTGGGAGAGAATTGTCCATTGGAACTTGCTATGTTTGTGATTGAAATGATTGATGATTGCATAAAGACAGATCCAGCAAGTCGCCCTAGTGTGCATGAGATTGTGCAATCTCTTTCAAGAACAGTGAACTCTTCACTGAGTTGGGAAAGGTCAATGAATGTCCCACGAAATTAA 1905 0.422 MHLFPFIPIIIFTLLIHNFSLILGQQPYIGLGTVACPRRGNKNSIRGYTCNGANHSCQSYLTFRSQPIYNSVKTISTLLGSDPSQLAKINSVSMNDTFETNKLVIVPVNCSCSGEYYQTNTSYVFQNSETYLLIANNTFEGLTTCQALENQNHNPANIYPGRRLLVPLRCACPTKNQTKKGIRYLLSYLVNWGDSVSFISEKFGVNFMSTLEANTLTLTQAMIYPFTTILVPLHDKPSSSQTVSPTQRISPPPSPPSSDHSSNKTWVYVVVGVVVGAIALTSVLCAVIFFKRYRKNRNKDDSLVAVPKSFEAIEEKPQVKVNEKLSENISGIAQSFKVYNFEELQRATDNFSPSSWIKGSVYRGVINGDLAAIKKIEGDVSKEIEILNKINHTNVIRLSGVSFHEGRWYLVYVYATNGDLSEWIYFNNVDGKFLSWTQRMQIALDVATGLDYLHSFTSPPHIHKDINSSNILLDGDFRGKVANLSLARCLEGGDDQFPTTRHIVGTRGYMAPEYLENGLVSTKLDVYAFGVLMLEMVTGKEVAAILTEDETKLSHVLSGIPGERSGKEWLKEFVDPSLGENCPLELAMFVIEMIDDCIKTDPASRPSVHEIVQSLSRTVNSSLSWERSMNVPRN 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00578 634 Pfam Protein kinase domain 360 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00578 634 ProSiteProfiles Protein kinase domain profile. 319 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00578 634 MobiDBLite consensus disorder prediction 237 261 - -
Gma11g00578 634 Gene3D Transferase(Phosphotransferase) domain 1 416 630 - -
Gma11g00578 634 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 9 630 - -
Gma11g00578 634 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 9 630 - -
Gma11g00578 634 ProSiteProfiles LysM domain profile. 186 231 IPR018392 -
Gma11g00578 634 Pfam LysM domain 188 232 IPR018392 -
Gma11g00578 634 SUPERFAMILY Protein kinase-like (PK-like) 333 615 IPR011009 -
Gma11g00578 634 Gene3D Phosphorylase Kinase; domain 1 320 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00578 Gma-Chr11 4861067 4862971 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00578 4 628 Receptor kinase-like Gene Family AT2G23770 43.887 1.13e-170 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma11g00578 Pkinase 2.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00578 - - gmx:100779907 1248.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00578 11 4861067 4862971 Gma11g00578 11 4861067 4862971 ECH
Gma01g01822 01 53813368 53815686 Gma11g00578 11 4861067 4862971 GST