Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00570 ATGGACTGCTTTGGAGAAGCAAGTGTTATCAAAGTGCTTCCTTGTTCTGGTGTTCAATATGCTGGGGAATCTGATTGCCCTCAGCAGAGTTCAGGAACAGCATTTGTATACCTGGAACAACCTAATTGTCCAGAAAATGGTGAACAAGTCAACTTTGTAGCTGCTCGATTGAATGAATCATCACATAGGATGCAAGGGCCTCAGATAGAAAGACAAGAAGACATGGTAAATGAACCTTTCTTGACATCTGAGAACTCTGTCTCTGTTGTGGATACAATTGAAAGTGAATCACCAAACAACAGTAGGGAAGGAGACTTGTCATGTTCCGAACCCAAGTGGCTAGAGGGAGATGAATCTGTGGCATTGTGGATCAAGTGGAGAGGGAAGTGGCAGGCTGGTATCCGATGTGCAAGGGCTGACTGGCCGTCATCAACTTTGAAAGCAAAACCAACTCATGACAGAAAGAAATATTTTGTTATATTTTTTCCACACACAAGGATTTATTCTTGGGCGGACATGCTGCTTGTTAGATCAATTAATGAGTATCCCCATCCTATTGCATATAAGACTCATCAGGTGGGATTGAAAATGGTAAAAGACTTAACTGTTGCACGGAGGTTTATAATGCAAAAGCTAGTCGTTGGCATGCTGAACATGGTCGATCAGTTTCATTTTAGTGCTTTGACAGAAACTGCACGTGATGTGAAGGTCTGGAAGGAATTTGCAATGGAGGCTTCTCGTTGTAATGATTATTCCAATTTTGGAAGAATGCTTCTAAAGCTGCATAATAGCATACTCCAGCACCATATAAATGCTGACTGGTTACAGCATTCTTATCCCTCTTGGGCTGAAAGATGTCAGAGTGCAAATAGCGCTGAATCAGTAGAGCTTCTAAAGGAGGAATTATTTGATTCTATTTTGTGGAATGGGGTTAATACTCTCTGGGATGCAGTTGCACCAATGCAACCAACATTAGGTTCTGAATGGAAAACCTGGAAGCAGGATGTAATGAGATGGTTTTCTACACCACCCTCCTTATCAAGCAGCAAAGACACCCGGCAACAGAGTTCTGATGATTTGTACCAAGCAAACCTTCAGGTTTGTAGAAAAAGGCCCAAACTTGAAGTTCGTCGTGCAGATACACATGCTTCACAAGTGGAAATCAAGGACCAAACTATTGCTCTTGAGGCTGACCCTGGCTTCTTTAAGAATCAGGACACATTGAGCACATTAGCAGCTGAGTCTTGCAAACAGGAAGGTGTTAGGGAGGTGTCTGTGGCAACTGCTTCACCTAGTAATTTGGCCAATAAATGGAATGAAATTGTAGTTGAGGCTACCGATTCTGATTTTTTGCATACCAAAGAAATGGAATCAACACCTACAAATGAACTGACTGTTGCAAATTCTGTAGAACCTGGTAGTAAGAATCGACAATGTATAGCTTATATTGAAGCAAAGGGAAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTATACTGTTGTGTACATTTGTCCTCTCGATTTTTGGGCAGCCCAACAAAATCTGAAAAGCCTGTTCCAGTTGATACTCCAATGTGTGAAGGTACAACTGTTCTGGGTACTAGATGTAAGCATCGTGCCCTACCTGGCTCTTTATTCTGTAAGAAACACCGACCACATGCTGAAACAGAGCAGACATCAAATTTACCCCAGAATACACTAAAGAGGAAGCACAAAGAAAATTATACTGGTTCAGAGGACATGTTTGGCAAAGACTTGGTATTGGTAAATCTTGAAAGTCCACTGCAAGTGGATCCAGTGTCATCCATTGGTGCTGATTCTGTACATGGAGAAAGCAACTTTAATGAGAAACCCATGCATTCTGAAAATGATCATAATGCAATGGTGACAATGCACTGTATAGGTTCTCCTCCCTTTGATAAGAAAAATCCTTGTATGGAAGGTCCTAAAAGGTATTGCTTGTACTGTGAAAGTCACCTTCCAAGCTGGCTTAAGTGTGCAAGAAATGGGAAGAGTAGAATAGTATCAAAAGAAGTGTTCACAGGACTTTTGAGGGACTGCAGCTCATGGGAGCAAAAGGTACATCTGCATAAAGCATGTGAACTATTTTACAGGTTATTCAAAAGCATTTTATCATTAAGAAACCCTGTTCCTAAGGATGTCCAATTCCAGTGGGCTTTGACTGAAGCCTCTAAAGATTCCAATGTAGGAGAGTTTTTTACAAAGTTAGTTCACAGTGAAAAGGCAAGAATCAAGTTAATATGGGGATTCAATGATGACATGGATATAACCTCTGTCATGGAAGAACCACCACTCTTGCCATCCACAATTAATGATAACTGTGATGAGGAAAATGCCATCAAATGTAAGATATGCTCTGCAGAATTTCCTGATGACCAAGCACTTGGTAACCATTGGATGGACAGTCATAAAAAGGAAGCACAGTGGCTCTTTAGAGGCTATGCATGTGCCATTTGTCTGGATTCGTTTACTAACAGAAAACTATTGGAAACTCATGTTCAGGAGAGACATCATGTGCAATTTGTTGAACAATGCATGCTTCTCCAATGCATTCCTTGTGGGAGTCATTTTGGAAATACTGATCAATTATGGCAACATGTTTTATCAGTTCACCCTGTTGATTTTAAACCATCAAAAGCTCCTGACCAGCAAACTTTCTCTACTGGCGAAGATTCTCCTGTAAAACATGATCAGGGAAATTCAGTCCCCTTGGAGAATAATTCTGAGAATACAGGTGGTTTACGGAAATTTGTTTGCAGGTTTTGTGGGTTGAAATTTGATTTACTACCTGACCTAGGTCGACATCACCAAGCTGCTCATATGGGGCCAAATCTGGCTAGCAGTCGCCCTGCAAAGAGGGGAGTTCGCTATTATGCATATAGATTAAAATCTGGCAGACTTAGCCGCCCTAGATTTAAAAAAGGTTTGGCAGCAGCATCATACAGGCTTAGAAATAAGGCTAATGCTAATTTAAAGCGAGGCATTCAGGCAACAAACTCACTTGGCACGGGAGGAATAACCATACCACCTCATGTTACTGAAAGTGAAACAACAAATATTGGTAGATTGGCAGAACATCAATGCTCAGCTGTTTCAAAGATTTTGTTTTCTGAGATTCAAAAAACGAAACCTCGGCCCAACAATCTTGACATTTTATCAATTGCTCGCTCTGCTTGCTGCAAAGTTAGTCTTGTAGCCTCACTGGAGGAGAAATATGGAATTTTGCCTGAAAAGCTCTATTTGAAGGCAGCAAAAATTTGCAGTGAGCATAGTATTTTGGTAAATTGGCACCAGGAGGGGTTTATTTGTCCTAGAGGTTGTAATGTATCAAAGGATCAAGCTTTGCTCTCTCCGTTAGCATCGCTTCCTAGTAATTCTGTAATGCCCAAATCTGTGAATTTATCTGATCCTGCAAGTGATGAGTGGGAGGTGGATGAATTTCACTGCATCATCAATTCGCGTACCTTAAAATTAGGTTCAGTGCAGAAAGCTGTTATCTTGTGTGATGACATTAGCTTTGGGAAGGAATCAGTTCCAGTGATTTGTGTAGTAGATCAAGAACTTACACATTCTCTTCATATGAATGGGTGTAATGGACAAAATATAAGCTCTTCTATGCCTTGGGAGACCATTACCTATGTTACAAAGCCAATGCTTGATCAATCCCTTAGTCTTGATTCAGAGAGTCTGCAATTGGGATGTGCCTGCTCATACACTAGTTGCTGTCCTGAAACTTGCGATCATGTATACCTTTTTGGCAATGACTATGATGATGCAAAAGACATATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGATGAGAATGGTCGAATAATCTTGGAGGAAGGTTATCTTGTCTATGAGTGTAATCATATGTGCAGATGCAATAAATCCTGTCCAAACAGAGTATTGCAGAATGGAGTACGAGTCAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGCAGTAAGGGCTGGTGAAGCTATTCTACGTGGCACATTTGTGTGTGAATACATTGGTGAAGTTTTAGATGTGCAAGAGGCACGCAATAGGCGCAAGAGGTTTACatttcttctagatgtaatttcttttagattaattGATTTTTCCCTTTATACTGACTTGGTCTATATCAATATCAGATATGGTACAGAACATTGCAGTTATTTCTACGACATTGATGCTCGTGTTAATGATATAGGCAGATTGATTGAAGGACAAGCTCAATATGTAATTGATTCTACTAAGTTTGGAAATGTCTCAAGATTCATCAATCATAGCTGCTCACCAAATCTTGTCAATCACCAAGTTATTGTAGAGAGCATGGATTGTGAACGTGCACATATTGGTTTTTATGCAAGTCGAGATATTACTTTGGGTGAAGAGCTAACGTATGACTATCAGTACGAGCTTATGCCTGGAGAAGGATCTCCTTGTCTTTGCGAATCCTTGAAGTGTAGGGGACGCCTTTATTAG 4506 0.4043 MDCFGEASVIKVLPCSGVQYAGESDCPQQSSGTAFVYLEQPNCPENGEQVNFVAARLNESSHRMQGPQIERQEDMVNEPFLTSENSVSVVDTIESESPNNSREGDLSCSEPKWLEGDESVALWIKWRGKWQAGIRCARADWPSSTLKAKPTHDRKKYFVIFFPHTRIYSWADMLLVRSINEYPHPIAYKTHQVGLKMVKDLTVARRFIMQKLVVGMLNMVDQFHFSALTETARDVKVWKEFAMEASRCNDYSNFGRMLLKLHNSILQHHINADWLQHSYPSWAERCQSANSAESVELLKEELFDSILWNGVNTLWDAVAPMQPTLGSEWKTWKQDVMRWFSTPPSLSSSKDTRQQSSDDLYQANLQVCRKRPKLEVRRADTHASQVEIKDQTIALEADPGFFKNQDTLSTLAAESCKQEGVREVSVATASPSNLANKWNEIVVEATDSDFLHTKEMESTPTNELTVANSVEPGSKNRQCIAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSPTKSEKPVPVDTPMCEGTTVLGTRCKHRALPGSLFCKKHRPHAETEQTSNLPQNTLKRKHKENYTGSEDMFGKDLVLVNLESPLQVDPVSSIGADSVHGESNFNEKPMHSENDHNAMVTMHCIGSPPFDKKNPCMEGPKRYCLYCESHLPSWLKCARNGKSRIVSKEVFTGLLRDCSSWEQKVHLHKACELFYRLFKSILSLRNPVPKDVQFQWALTEASKDSNVGEFFTKLVHSEKARIKLIWGFNDDMDITSVMEEPPLLPSTINDNCDEENAIKCKICSAEFPDDQALGNHWMDSHKKEAQWLFRGYACAICLDSFTNRKLLETHVQERHHVQFVEQCMLLQCIPCGSHFGNTDQLWQHVLSVHPVDFKPSKAPDQQTFSTGEDSPVKHDQGNSVPLENNSENTGGLRKFVCRFCGLKFDLLPDLGRHHQAAHMGPNLASSRPAKRGVRYYAYRLKSGRLSRPRFKKGLAAASYRLRNKANANLKRGIQATNSLGTGGITIPPHVTESETTNIGRLAEHQCSAVSKILFSEIQKTKPRPNNLDILSIARSACCKVSLVASLEEKYGILPEKLYLKAAKICSEHSILVNWHQEGFICPRGCNVSKDQALLSPLASLPSNSVMPKSVNLSDPASDEWEVDEFHCIINSRTLKLGSVQKAVILCDDISFGKESVPVICVVDQELTHSLHMNGCNGQNISSSMPWETITYVTKPMLDQSLSLDSESLQLGCACSYTSCCPETCDHVYLFGNDYDDAKDIFGKPMRGRFPYDENGRIILEEGYLVYECNHMCRCNKSCPNRVLQNGVRVKLEVFKTEKKGWAVRAGEAILRGTFVCEYIGEVLDVQEARNRRKRFTFLLDVISFRLIDFSLYTDLVYINIRYGTEHCSYFYDIDARVNDIGRLIEGQAQYVIDSTKFGNVSRFINHSCSPNLVNHQVIVESMDCERAHIGFYASRDITLGEELTYDYQYELMPGEGSPCLCESLKCRGRLY 1501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00570 1501 MobiDBLite consensus disorder prediction 888 916 - -
Gma11g00570 1501 ProSitePatterns Zinc finger C2H2 type domain signature. 790 811 IPR013087 -
Gma11g00570 1501 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 42 1501 - -
Gma11g00570 1501 ProSitePatterns Zinc finger C2H2 type domain signature. 858 879 IPR013087 -
Gma11g00570 1501 Pfam Pre-SET motif 1179 1311 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma11g00570 1501 Gene3D Classic Zinc Finger 781 853 - -
Gma11g00570 1501 ProSiteProfiles SET domain profile. 1319 1478 IPR001214 GO:0005515
Gma11g00570 1501 Pfam Zinc finger C2H2-type, 3 repeats 824 949 IPR040689 -
Gma11g00570 1501 Pfam SET domain 1330 1477 IPR001214 GO:0005515
Gma11g00570 1501 SMART c2h2final6 856 879 IPR013087 -
Gma11g00570 1501 SMART c2h2final6 925 948 IPR013087 -
Gma11g00570 1501 SMART c2h2final6 822 845 IPR013087 -
Gma11g00570 1501 SMART c2h2final6 788 811 IPR013087 -
Gma11g00570 1501 SUPERFAMILY SET domain 1168 1491 IPR046341 -
Gma11g00570 1501 SMART set_7 1319 1484 IPR001214 GO:0005515
Gma11g00570 1501 Gene3D SET domain 1168 1501 IPR046341 -
Gma11g00570 1501 MobiDBLite consensus disorder prediction 887 916 - -
Gma11g00570 1501 SMART preset_2 1176 1303 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma11g00570 1501 ProSiteProfiles Zinc finger C2H2 type domain profile. 925 953 IPR013087 -
Gma11g00570 1501 ProSiteProfiles Pre-SET domain profile. 1240 1316 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma11g00570 1501 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 42 1501 - -
Gma11g00570 1501 ProSitePatterns Zinc finger C2H2 type domain signature. 927 948 IPR013087 -
Gma11g00570 1501 ProSiteProfiles Zinc finger C2H2 type domain profile. 822 845 IPR013087 -
Gma11g00570 1501 ProSiteProfiles Post-SET domain profile. 1485 1501 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00570 Gma-Chr11 4737802 4748610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00570 103 1500 C2H2 Transcription Factor Family AT2G23740 51.201 0.0 1390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma11g00570 SET 1.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00570 - - gmx:100776704 2874.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00570 11 4737802 4748610 Gma11g00570 11 4737802 4748610 ECH
Gma01g01831 01 53940576 53950678 Gma11g00570 11 4737802 4748610 GST