Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00550 atgtcattttcgttgttcgccactccgcagcaacagcaaccgcagcagcagtctccttttcagccacagcaaactagtttgttccttccgcagcagcagcaacaatttcaacaacagcaacaacaacaacaacagcaacaacaacaacaacagcaacaatttcaacaacagcaacagcagcagcagccgcaacagcagttgtttttgtttactaacgatagAACCCCCGCTAGTTATAGTACCAATTGGGCGGATCTTCATCCTGATTCCCAGAAGATTCTCCTTCAGATCGAGGAGCGGATATTGGAGTTTAGGGATGAAAGCCAGAGACTAGATCAGTGTAGTCGTCTTTATGATTCTTCAGTTTCCAACGATGGATTTGAGCTTGATGCAGGTCATATAGTTCAGGAACTTGGTGGAATTAACACTGCTATGGAACGACAGAAAACATTGCTACATGAACTGATGTCCACTGTTAAGGATATGTTACGCAACACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGCCCTAGGTTCCTTCATCCGAGTGGGGGTACATCAAGTGCCACTGCCCCATCACAGACTCCTGGTGCAACTATAGCACCTAGTTCGAGTAGCCAACCAACAACTGCTTCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAGGAAACCGTCTCCGTTTTTACAGCAGACAGTTTTAAGATTTGAGAAGTATCTTGGTGAGTGCCATCAGTGGATTGAAGAGTTGGAGCAGCTGCTTCTCTTGGAGTCTGAGAGAAATGCATCCAGTAATGGTTCCTCATTATTGCAATCTCTTCCCAAGGTCATGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCGAAGGTGGAGAGCATTCATCAGTACATTGAATCAATGAAATCAGCATACCTAGCTGATCAGCGTCACCGGGGGGAGGTGAATGATCCATTTTTGGAGGCAGATCGGCGAGAAACTGCAAGACAAGAAGCTGCCTCAAAAAGAGTTCATCCAACATTGCATTTACCTGCAAATTCACAGCCCTCAACCCAAGTTGCTGGGTTGTTTTCCAGTTCTGGGACTCAAGCAGCATTGCCTGCCCCACAGACAGCTGCATCAACTTCATCTTTGTCATCAGGAAGTGGATTATCTCTTTTTAGCACACCATCTTCTGCTCCATCATCTTCTATGTTGTCATCTCTGTTTGCAACACCAACTCCTGCTCCAGGACCGCAAACCTCACTTTTTGGCTCTACAACACCTGTACCTGGTCCTGTATCAACTCCCTCTCTGTTTGGTAATACTACTCCATTGTTTAGTACGACTCCAGCTACAAATTCTCTCTTTTCAAGTCCATTTGTTTCAGGCACTGCAACAGGATCTGGGGCTAGCTTTGGACCTGGGACGAAAAATCAACGGGTGAAATCCAGAACTGCTCGACGCTAA 1458 0.3861 MSFSLFATPQQQQPQQQSPFQPQQTSLFLPQQQQQFQQQQQQQQQQQQQQQQQFQQQQQQQQPQQQLFLFTNDRTPASYSTNWADLHPDSQKILLQIEERILEFRDESQRLDQCSRLYDSSVSNDGFELDAGHIVQELGGINTAMERQKTLLHELMSTVKDMLRNTEVAVRSFMMLRPRFLHPSGGTSSATAPSQTPGATIAPSSSSQPTTASIVPVFDFYSGLPRKPSPFLQQTVLRFEKYLGECHQWIEELEQLLLLESERNASSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSAYLADQRHRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQAALPAPQTAASTSSLSSGSGLSLFSTPSSAPSSSMLSSLFATPTPAPGPQTSLFGSTTPVPGPVSTPSLFGNTTPLFSTTPATNSLFSSPFVSGTATGSGASFGPGTKNQRVKSRTARR 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00550 485 Coils Coil 29 60 - -
Gma11g00550 485 MobiDBLite consensus disorder prediction 344 358 - -
Gma11g00550 485 Gene3D - 227 317 - -
Gma11g00550 485 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 9 481 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Gma11g00550 485 MobiDBLite consensus disorder prediction 462 477 - -
Gma11g00550 485 MobiDBLite consensus disorder prediction 370 425 - -
Gma11g00550 485 MobiDBLite consensus disorder prediction 1 32 - -
Gma11g00550 485 MobiDBLite consensus disorder prediction 319 339 - -
Gma11g00550 485 MobiDBLite consensus disorder prediction 184 210 - -
Gma11g00550 485 MobiDBLite consensus disorder prediction 462 485 - -
Gma11g00550 485 MobiDBLite consensus disorder prediction 319 358 - -
Gma11g00550 485 PANTHER NUCLEOPORIN P58/P45 9 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00550 Gma-Chr11 4584876 4590034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00550 67 485 NAC Transcription Factor Family AT4G37130 63.741 5.55e-180 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00550 K14307 - gmx:100805204 764.607