Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00542 ATGGCAGATCTGTTCAGTGGAGGTGCCGTGGGGGCAGTGATGGGGGAGTTGCTGAAAGGGGCAATTGCGACCATAAACAAAGGTCGAGACTTCGGACCCACCCTCGAGAGCAACATAGAAACCTTAAACTCTCTGGCTCCTCAAGTGGAGGAGATGAAGCGTTACAACAAGATGTTGGATCGCCCCATAGAGGAGATAGCGAGGTTGGAGTCTCAAATGCAAGCTGGCGAAGAGCTGGTTCGCAAGTGCTCCAAATTCGGTCGCTGGAGAATGCTCTCTTTCCCTTATTACCAGAGCAAGCTTAAGAGCAACGACGCGAATTTGAAGAGGCACTTTTCGGTCAACGTTCCGGCGGAGAACAAGAGGGACTTGATGGAGGTGGTGGCCAGTGTGAGACAGATTCTGGAAATTCTATCCAAGAAGGAGGATTTCAGGCACTCGTTCCATTTAAGGGGTCTAAGTGGGGCTCCCCAAGAACCTGAGTGCGTGGGAATGGATGTGCCTTTGAGCAAGTTGAGGATTGACTTGCTCAAGGATGGTGTTTCTGTTCTTGTCTTGACTGGTTTGGGGGGATCGGGGAAAAGCACGCTTGCTAAGAAGATCTGTTGGGACCCTCAAGTCAAAGGAAAGTTTGAGGGAAACATCTTCTTTGTCACCGTCTCAAAAACACCAAACTTGAAGTACATTGTAGAGACACTGTTTGAACACTGTGGTTGTCCGGTGCCTAAGTTTCAAAGTGACGAAGATGCAATCAACCGACTGGGAGTTCTGCTGAGGCTTGTTGGGAAAAATCCAATATTGTTGGTCTTGGATGATGTTTGGCCTAGCTCAGAAGCCCTTGTTGAGAAGTTTAAAATAGACATACCTGATTACAAGATCTTGGTGACTTCAAGGGTTTCATTTCCAAGATTTGGCACACCATGCCAATTGGATAAACTTGATCATGATCATGCGGTCGCCCTTTTCTGTCACTTTGCACAGCTGAATGGCAAGAGCTCATACATGCCTGATGAAAAACTTGTCGACGAGATTGTGAGAGGTTGCAAGGGTTCACCGTTGGCGCTTAAGGTCACTGCAGGATCACTCTGTCAGCAGCCTTATGAGGTGTGGCAAAATATGAAGGATCGTTTGCAAAGTCAATCCATTCTGCTGGAGTCTAGTAGTTCTGATTTGCTTTTTCGTCTTCAACAAAGTTTGGATATATTGGAGGATAAGTTCAAAATCAACGAAAAGGTGTGCTTCATGGATCTGGGACTATTTCCTGAAGACCAAAGGATTCCTGTTGCTGCCCTTATTGATATGTGGGCAGAACTGCATAACCTTGATGAAAATGGTAGGAATGCAATGACCATCATCCATGATTTAACCATCAGGAATTTGATTAATGTCATAGTCACAAGGAAAGTAGCAAAGGATGCAGACATGTACTACAATAACCACTTTGTTATGCTGCATGATCTCCTTAGAGAGCTATCAATCTGTCAAAGCAAAGAGAAACCATTTGAACAGAGGGAAAGACTGATTATTGACTTAAATGGAGATAATCGTCCTGAATGGTGGATAGGACAGGATGAGCAAGGAGTCATTGGCCGGATGTCCTCATTCTTCCTCAGAATGTTGTATAGACAGAAACAGCTAAGAGTTGCTGCACGCATATTGTCTATTTCAACTGATGAAACATTTACTTCAGATTGGTGTGACATGCTACCTGATGAAGCTGAGGTTCTGGTTTTAAATCTCAACTCTAGCCAGTACTCATTACCAGAGTTCACAGAAAAGATGAGTAAACTTAGAGTTCTGTTAGTCACAAATTATGGTTTCCATCGTTCAGAATTAAACAAGTTTGAGCTACTTGGTTCTTTATTTAACTTGAAAAGAATTAGATTGGAAAAGGTTTCAGTCCCTTCCTTGTGCATATTGAAGAATCTGCAAAAATTGTCCCTTCATATGTGTAATACAAGGCAGGCTTTTGAAAACTGTTCTATCCAAATCTCAGATGCAATGCCAAATCTTGTGGAGATGAGCATTGACTATTGTAATGATCTGGTTAAATTGCCTGATGGGATGAGTAACATCACCCCGTTGAAGAAGCTTAGTATCACTAACTGTCACAGGCTATCTACACTGCCACAAGATATTGCAAAGCTCGAGAATTTGGAAGTTCTAAGGTTATGTTCTTGCTCTGGTTTGGTAGAGATGCCAGATTCTGTTAAAGGGCTTTACAAGCTAAGTTGTCTTGACATCTCAGATTGTGTAAGTCTGTCCAGATTACCAGACGACATTGGTGAGTTGAAGAAGCTTGAGAAGCTCTACTTGAAGGGTTGCTCAAAACTGAGTGAATTTCCGTACTCTGTCGTTAATTTTGGAAATTTAGAGCATGAAATATATGTGATCTGTGACGAAGAAATAGCTGCCTTGTGGGAAAACTTCCCCACCATGCCCAAGTTGAAGATAGAGATATCTACAATGGAGATTAACTTGAATTGGCTTCCAGGAGTTCATTCCTGA 2508 0.4306 MADLFSGGAVGAVMGELLKGAIATINKGRDFGPTLESNIETLNSLAPQVEEMKRYNKMLDRPIEEIARLESQMQAGEELVRKCSKFGRWRMLSFPYYQSKLKSNDANLKRHFSVNVPAENKRDLMEVVASVRQILEILSKKEDFRHSFHLRGLSGAPQEPECVGMDVPLSKLRIDLLKDGVSVLVLTGLGGSGKSTLAKKICWDPQVKGKFEGNIFFVTVSKTPNLKYIVETLFEHCGCPVPKFQSDEDAINRLGVLLRLVGKNPILLVLDDVWPSSEALVEKFKIDIPDYKILVTSRVSFPRFGTPCQLDKLDHDHAVALFCHFAQLNGKSSYMPDEKLVDEIVRGCKGSPLALKVTAGSLCQQPYEVWQNMKDRLQSQSILLESSSSDLLFRLQQSLDILEDKFKINEKVCFMDLGLFPEDQRIPVAALIDMWAELHNLDENGRNAMTIIHDLTIRNLINVIVTRKVAKDADMYYNNHFVMLHDLLRELSICQSKEKPFEQRERLIIDLNGDNRPEWWIGQDEQGVIGRMSSFFLRMLYRQKQLRVAARILSISTDETFTSDWCDMLPDEAEVLVLNLNSSQYSLPEFTEKMSKLRVLLVTNYGFHRSELNKFELLGSLFNLKRIRLEKVSVPSLCILKNLQKLSLHMCNTRQAFENCSIQISDAMPNLVEMSIDYCNDLVKLPDGMSNITPLKKLSITNCHRLSTLPQDIAKLENLEVLRLCSCSGLVEMPDSVKGLYKLSCLDISDCVSLSRLPDDIGELKKLEKLYLKGCSKLSEFPYSVVNFGNLEHEIYVICDEEIAALWENFPTMPKLKIEISTMEINLNWLPGVHS 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00542 835 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 2 133 IPR008808 -
Gma11g00542 835 Gene3D - 152 301 IPR027417 -
Gma11g00542 835 Gene3D Ribonuclease Inhibitor 549 803 IPR032675 -
Gma11g00542 835 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 820 IPR039203 GO:0050832
Gma11g00542 835 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Gma11g00542 835 SUPERFAMILY L domain-like 557 792 - -
Gma11g00542 835 Gene3D - 395 494 IPR036388 -
Gma11g00542 835 PRINTS Disease resistance protein signature 183 198 - -
Gma11g00542 835 PRINTS Disease resistance protein signature 260 274 - -
Gma11g00542 835 PRINTS Disease resistance protein signature 348 362 - -
Gma11g00542 835 PRINTS Disease resistance protein signature 762 778 - -
Gma11g00542 835 Gene3D - 312 390 IPR042197 -
Gma11g00542 835 Pfam NB-ARC domain 174 396 IPR002182 GO:0043531
Gma11g00542 835 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 417 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00542 Gma-Chr11 4521846 4526739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00542 620 784 WRKY Transcription Factor Family AT4G12020 29.586 2.15e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00542 - - gmx:100817860 1627.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01863 01 54167932 54172640 Gma11g00542 11 4521846 4526739 GST
Gma11g00542 11 4521846 4526739 Gma17g01667 17 20541184 20546064 PCT
Gma11g00542 11 4521846 4526739 Gma05g00844 05 17452968 17458092 PCT
Gma17g01667 17 20541184 20546064 Gma11g00542 11 4521846 4526739 PCT
Gma05g00844 05 17452968 17458092 Gma11g00542 11 4521846 4526739 PCT