Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00536 ATGCGTTGGTTCCCTACCCTCATCTTCTCCCATTCTCATTCTCAGTCTAATTCATCAACATCAACTTCGTCCTCATCTTCTTCGGCGACTCTAAAGTCTTCCCCTTCGACGTCCTCTGCCTCCGAACCCAGGAAGAACAGCCGCTCCGCCTGGTTCTTCGGGAAAAGGTCGACGTCGACGCGTTCCAGGAAGCTAACCCACATCGCCGACTTAGACGCCCTTGTCGTGCCCCCCTTGTCTCGCTCCCCCAGCACCTTCGATCGTTCCTCCACCTCATGCGTTCAGCCTCAGCCTTTGCCCTTGCCCAGAGACGCTGATTACCGTTTTCCCTCGCCCAAAGATGCCGCCGTCGACAGACCTGACGCCGCCGCCGTCGATGTCACCCTCAGCCCTGGTTTTCGGATGCGCAGTGTTTTTGCGAGGCAAGAGGCAGTGAAAAGTGTGGAGCAGGCGGAGACAAGCAGTCAAGGAGATGGGTGCTGGTTCCCTGCAAGAAGTGCTCCAACGAGTCCTTTCGCCAGTCCGAAAACTTGCATTAAGAAAAACGATGATTTTGTTCCATACCATTACGTCTCACCCAAAGGAAACCAGTTCTGGTCAGCACCAGAGATGCCCACATTCGACACTTCCCACCCACCTCCCGCTTTCTTTGATTTATCAGCATTACGCACCGATAAAATTCTTTCTCCCCACCAAAGCCCACCCGCAAAAAGCCTCGCTGCCCCACATCCAAAAAGCCCAACTGCCCCTTCTTCTTCTCTATCCATCCCCCCCAGGTTATCCCTTGACACCTCCATAGCACGTCGTGAAACCAATGCTCTTCTCACTGTTCACCCCTTACCTTTGCCTCCTTGGGCTGGGCCTGGGGCCCCCATGCTTTCCCCATCTTCTTCTACCTTTTCCCCTCCCTTGGCTAAGACTGAACCCATGCCCATGAAAAACCAGTGGCAAAAAGGGAAACTTCTTGGCCGTGGTACTTTTGGAACTGTTTATGCTGCCACCAATAGAAAAACTGGAGCATTGTGTGCAATGAAGGAAGCGGAAATATTTTCTGATGATCCAAAGTCTGCAGAGTGCATAAAGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCCATCTGCAACATCCAAACATTGTGCAGTATTATGGTAGCGAAATAGTAGAAGACAGGTTTTATATTTATTTGGAATATGTCCATCCCGGTTCAATGAATAAATACGTTCGTGAACATTGTGGTGCAATAACAGAATGTGTTGTTCGGAATTTCACGCGCCATATTCTATCAGGCTTGGCTTACTTGCATAGCAAAAAAACAATTCATAGGGACATCAAAGGAGCTAACTTGCTAGTTGATTCTGCTGGTGTTGTTAAGCTTGCTGATTTTGGGATGGCCAAGCACCTAACTGGACATGTTGCAGATCTTTCTTTGAAGGGAAGTCCATATTGGATGGCTCCAGAGCTTTTTCAAGCGGTTGTGCAAAAAGATAACAGCTCTGACCTTGCTTTCGctgttgatatttggagtttgggttgtacaattattgaaatgttcacggggaagcctccttggagtgagtacgaaggaGCCGCAGCTATGTTTAAGGTTATGAAGGATACCCCTCCTATACCAGAAACATTGTCAGCAGAGGGTAAAGATTTCCTAAGACTTTGCTTTATAAGAAATCCAGCAGAGCGACCAACTGCTTCAATGTTATTAGAACATCGATTTCTGAAAAACTTGCAACAGCCAGATGTTTCATCTTCCATGCAGCTGTATAATGGAACAAACTTGATGGATATCCATAGTCCCAGTGAGTTGTCTGAAAATAAACTTGATCAAATTTCTATTCAAAGTGCACATATTCCTAAATGA 1872 0.4557 MRWFPTLIFSHSHSQSNSSTSTSSSSSSATLKSSPSTSSASEPRKNSRSAWFFGKRSTSTRSRKLTHIADLDALVVPPLSRSPSTFDRSSTSCVQPQPLPLPRDADYRFPSPKDAAVDRPDAAAVDVTLSPGFRMRSVFARQEAVKSVEQAETSSQGDGCWFPARSAPTSPFASPKTCIKKNDDFVPYHYVSPKGNQFWSAPEMPTFDTSHPPPAFFDLSALRTDKILSPHQSPPAKSLAAPHPKSPTAPSSSLSIPPRLSLDTSIARRETNALLTVHPLPLPPWAGPGAPMLSPSSSTFSPPLAKTEPMPMKNQWQKGKLLGRGTFGTVYAATNRKTGALCAMKEAEIFSDDPKSAECIKQLEQEIKVLSHLQHPNIVQYYGSEIVEDRFYIYLEYVHPGSMNKYVREHCGAITECVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGHVADLSLKGSPYWMAPELFQAVVQKDNSSDLAFAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPIPETLSAEGKDFLRLCFIRNPAERPTASMLLEHRFLKNLQQPDVSSSMQLYNGTNLMDIHSPSELSENKLDQISIQSAHIPK 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00536 623 Pfam Protein kinase domain 317 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00536 623 MobiDBLite consensus disorder prediction 82 97 - -
Gma11g00536 623 SMART serkin_6 316 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00536 623 MobiDBLite consensus disorder prediction 9 59 - -
Gma11g00536 623 SUPERFAMILY Protein kinase-like (PK-like) 298 599 IPR011009 -
Gma11g00536 623 MobiDBLite consensus disorder prediction 292 311 - -
Gma11g00536 623 MobiDBLite consensus disorder prediction 9 62 - -
Gma11g00536 623 Gene3D Transferase(Phosphotransferase) domain 1 312 619 - -
Gma11g00536 623 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 619 - -
Gma11g00536 623 MobiDBLite consensus disorder prediction 228 258 - -
Gma11g00536 623 ProSiteProfiles Protein kinase domain profile. 316 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00536 623 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 619 - -
Gma11g00536 623 ProSitePatterns Protein kinases ATP-binding region signature. 322 345 IPR017441 GO:0005524
Gma11g00536 623 MobiDBLite consensus disorder prediction 81 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00536 Gma-Chr11 4461250 4465476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00536 1 614 MAP Kinase Kinase Kinase AT5G66850 53.812 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma11g00536 Pkinase 3.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00536 - - gmx:100793654 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01869 01 54249965 54257431 Gma11g00536 11 4461250 4465476 GST
Gma11g00536 11 4461250 4465476 Gma17g01653 17 19631188 19636421 PCT
Gma17g01653 17 19631188 19636421 Gma11g00536 11 4461250 4465476 PCT