LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma11g00501	ATGCATACTGGAAAGCTGGCAAACATCAAGAACAAGCTGTGTTTGATTTGTATTTTCGGAAGAACCCCTTTGGAGGAATGCGTGAGGTTCGTTACTAATTACAAGCTCACCAAGGAAGACATTGATTATATCAAAAATAATTTGTCTGTTTCATGTGAGGATGGCTTTCTGGACTATCTTAGAGGAATTGACTGTTCTGATGTTGAGTTCTATGCTATTCCCAAAGGATCAGTTGTTTTTCTTAAGGTGCCCCTATTGAGAATTGAAGGTCCAATTGCCGTTGTTCAATTGCTGGAAACACCTTTTGTCTATCTAATTAATTTTGCATCATTAGTTTCTACTAATGCTGCAAGGCATCGTTTTGTTGCTGGAAAACCAAAAACTCTACTTGAGTTTGGACTACGAAGGGCTCAGGGGCCTGATGGTGGAGTGGGTGCATCAAAGTACAGTTACATTGGGGGATTTGATGCAACAAGCAACGTTGCAGCAGGAATGTTATTTGGGATTCCCCTTCGTGACACTCATTCCCATGCATTCGTTAGCTCATTTATGCGATCGAATTCACTACGTGGCAATTTTGCTGAGACCAATCAAAGTGAGCTGGCCGCATTCACATATGCATTGGCATTTCCTGATAACTTTCTAGCCCTAGTAGACGCTGATGATGTCATGAGAAGTGGAATCCCTAACTTTTGTGTAGTTGCATTAGCTCTCAGTGATTTAGGATACAAAGCAATTGGCATTAGACTGGATTCTGGTGACCTTGGATATTTGTCTTGTGAGATCAGGAAGTTGTTTTGCTCCATTGAGAAGGAATTTGGATTGCCCGGTTTCGGGAAGATGAATATCACAACTAGTAATGACCTTAATGAGGAAAAATTAGATGCTTTAAACAAACAGTGCAAATGCAATACGCGTCGCGAGGCAGTGGGTGGAATGAATAGCAATACCACCGGCGCTGCAGCAATGAACGACCAGCTCTCCAACACCACCTCCATCTTCGGCCTCCGCCTATGGGTGGTTCTCGGGGTGTGCGTGGGCGCCGCCATCGTCCTCATCCTCTTCCTCATCTCTGTCTGGCTCGCCTTCAAGCGCTCTTCCAAAACCAACCCTGTTTCCATCCCCGACGTCTCCAAAGAGATCCAAGAAATCAGGCTCGACACCAACCCCACTCTCCAACCCGAACCTTACCCCGAACCTGACCCCGTTCCTCCCACCGAAGAGGAAACCAACTCCCTCGGCTACCACAGAATCCAGTTCGAGATTGGGAAGAACCACCGAATCTCGTACCCGGAGCGTGCCTTGCTTCGCTCCAGCTCCAATGACCCCAGCAGCGGCGAGGTTCAGCTTCCCACCGTCATTCCCGAAGTTTCTCACTTGGGTTGGGGCCACTGGTACACTCTAAGAGACTTGGAAGACGCCACTAACGGCTTCGCACCTGAGAATGTTATCGGCGAAGGTGGATACGGAATTGTTTATCACGGTATCTTGAACGACAATACGAATGTTGCTATTAAAAATTTGCTCAATAATAGGGGCCAAGCTGAGAAGGAGTTCAAGGTTGAAGTGGAAGCTATAGGACGTGTTCGCCACAAGAATTTAGTCAGGTTGCTTGGTTATTGTGCTGAAGGAGCTCATAGAATGCTTGTTTATGAGTACGTGGACAATGGTAATTTAGAGCAGTGGCTGCATGGGGATGTTGGGCCTTGCAGTCCTCTAACTTGGGAAATTCGAATGAACATTATTCTGGGAACGGCTAAAGGAttaacttatcttcacgaggggttagaaccaaaagttgttcaccgtgatattaaatcaagcaacattttgctcagtaagaagtggaatgcgaaggtttcagactttggcctcgcaaaactCCTTGGCTCTGACAGCAGCTATATCACAACCCGTGTCATGGGTACATTTGGATATGTTGCTCCTGAATACGCGAGTACTGGCATGTTGAATGAACGGAGTGATGTTTATAGTTTTGGAATTCTTATTATGGAACTAATTACAGGAAGGAATCCGGTTGATTATAGTCGGCCTCCAGAAGAGGTGAATTTGGTAGACTGGCTCAAGAAGATGGTTAGCAACAGAAATCCAGAGGGGGTGCTTGATCCCAAGCTTCCTGAGAAACCAACTTCAAGAGCACTAAAACGAGCTCTTCTTGTAGCTTTACGCTGCACTGATCCTAATGCACAAAAGCGGCCTAAAATGGGGCATGTGATACACATGCTTGAAGCTGAAGATTCCCCTTACAAAGAGgatcgcagagctaaaagggatgcaggacattcaCCTAATGATAGAGTAGGGGATGGGTTGAAAGAGGAGGTAACTGTGTCTGTGTCAGTTGATGATGGTAAGCTTGAAAATGGGATGTGTGCCAATGAGACAAGATCGAACCCTCAAATAGAAAAGCAATAA	2436	0.429	MHTGKLANIKNKLCLICIFGRTPLEECVRFVTNYKLTKEDIDYIKNNLSVSCEDGFLDYLRGIDCSDVEFYAIPKGSVVFLKVPLLRIEGPIAVVQLLETPFVYLINFASLVSTNAARHRFVAGKPKTLLEFGLRRAQGPDGGVGASKYSYIGGFDATSNVAAGMLFGIPLRDTHSHAFVSSFMRSNSLRGNFAETNQSELAAFTYALAFPDNFLALVDADDVMRSGIPNFCVVALALSDLGYKAIGIRLDSGDLGYLSCEIRKLFCSIEKEFGLPGFGKMNITTSNDLNEEKLDALNKQCKCNTRREAVGGMNSNTTGAAAMNDQLSNTTSIFGLRLWVVLGVCVGAAIVLILFLISVWLAFKRSSKTNPVSIPDVSKEIQEIRLDTNPTLQPEPYPEPDPVPPTEEETNSLGYHRIQFEIGKNHRISYPERALLRSSSNDPSSGEVQLPTVIPEVSHLGWGHWYTLRDLEDATNGFAPENVIGEGGYGIVYHGILNDNTNVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLSKKWNAKVSDFGLAKLLGSDSSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMELITGRNPVDYSRPPEEVNLVDWLKKMVSNRNPEGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEDRRAKRDAGHSPNDRVGDGLKEEVTVSVSVDDGKLENGMCANETRSNPQIEKQ	811

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma11g00501	811	CDD	STKc_IRAK	484	750	-	-
	Gma11g00501	811	Gene3D	Phosphorylase Kinase; domain 1	458	553	-	-
	Gma11g00501	811	Coils	Coil	498	518	-	-
	Gma11g00501	811	PANTHER	RECEPTOR-LIKE KINASE PLANT	319	802	-	-
	Gma11g00501	811	Gene3D	nicotinate phosphoribosyltransferase	18	127	-	-
	Gma11g00501	811	ProSiteProfiles	Protein kinase domain profile.	478	757	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Gma11g00501	811	ProSitePatterns	Protein kinases ATP-binding region signature.	484	506	IPR017441	GO:0005524
	Gma11g00501	811	MobiDBLite	consensus disorder prediction	750	811	-	-
	Gma11g00501	811	Pfam	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain	24	107	IPR040727	-
	Gma11g00501	811	SUPERFAMILY	Protein kinase-like (PK-like)	455	750	IPR011009	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma11g00501	Gma-Chr11	4183127	4192484	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma11g00501	329	745	Trihelix Transcription Factor Family	AT1G68690	40.000	3.22e-86	286

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-V	Gma11g00501		Pkinase	1.4e-46	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma11g00501	-		-	gmx:100797440	988.023

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