Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00498 ATGTCGTCGTCGTCCATGAAGAAGAATTGGGTTCGCGGAGAGTCTCTTGGTAGTGGCAGCTCCGCCACCGTCAACATAGCCATACCAACAAACCCTTCCACGCATAATTTTCCTTCACCCACCGCCGTCAAATCCTCCCTTTTCCTAACCTCGTATTCGCTCAAAACCGAGAAGGACGTCCTCGACATTCTTGGACCTTCCCCAAACATCATTAAATGTTACGGAAACGATTGCACCGTCGAAAACGGCAAGAGATACTACAACGTTTTTCTCGAATACGCCGCGGGCGGTTCCCTCGCCGATCAACTCAGAAAGTACGGCGGGAGGTTCCCGGAGGCTTACGTTCGACGACGCACAAAATCCATCTTGGAGGGTCTGAAGCACATTCACTCCAAGGGCTACGTCCACTGCGATGTGAAGCCTCAGAACATTCTTGTCTTCGACAATGGTGTTGTTAAGATCGCGGATTTGGGGCTGGCGAAGAGGAGAGGGGAGATAAATAGAGAGTACGTGTGCAGGGGCACGCCGATGTATATGTCACCGGAATCGCTGACCGATAACGTGTACGAGTCGCCGGTAGATATATGGGCTTTGGGCTGCACCATCGTGGAAATGATCACAGGAGAACACGCGGGTACGTTGGAAGCTGCGAGAATACTTGGACGTTGA 669 0.5187 MSSSSMKKNWVRGESLGSGSSATVNIAIPTNPSTHNFPSPTAVKSSLFLTSYSLKTEKDVLDILGPSPNIIKCYGNDCTVENGKRYYNVFLEYAAGGSLADQLRKYGGRFPEAYVRRRTKSILEGLKHIHSKGYVHCDVKPQNILVFDNGVVKIADLGLAKRRGEINREYVCRGTPMYMSPESLTDNVYESPVDIWALGCTIVEMITGEHAGTLEAARILGR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00498 222 ProSitePatterns Protein kinases ATP-binding region signature. 16 44 IPR017441 GO:0005524
Gma11g00498 222 Gene3D Transferase(Phosphotransferase) domain 1 101 216 - -
Gma11g00498 222 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 9 213 - -
Gma11g00498 222 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 9 213 - -
Gma11g00498 222 SMART serkin_6 10 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00498 222 ProSiteProfiles Protein kinase domain profile. 10 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00498 222 SUPERFAMILY Protein kinase-like (PK-like) 7 210 IPR011009 -
Gma11g00498 222 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Gma11g00498 222 Gene3D Phosphorylase Kinase; domain 1 3 100 - -
Gma11g00498 222 Pfam Protein kinase domain 12 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00498 Gma-Chr11 4160906 4161574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00498 10 215 MAP Kinase Kinase Kinase AT4G36950 53.623 2.50e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma11g00498 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00498 - - gmx:100816949 421.394