Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00492 ATGTGGAATCTGAATGACTCTCCCGATCAGAGAAAGGACTATGAATCTGAAGGCTGTTCTTCTTCTCTGAATGATGATAAAGGCAAGAGAGTGGGATCTGCTTCCAATTCAAGCTCCTCTGCGGTGGTAGTTGAAGATGGATCGGAAGAAGAAGACAGTGAAAGAGGTGGAAGCAGAACATTGGACAAGAAAACCAACAAAATATTCGGCTTTGCGGTAGCCCATGATGACAGTGACCACCCACCCGTGACCCATCAGTTTTTTCCTGTTGAGGACTCCGAACTGCCTGTCTCCGCCGCCGCCGCAGGCAGTGGAGGCGGTGGCGGCGGAAGCTCCTTCCCACGTGCTCACTGGGTAGGTGTCAAATTTTGTCAATCGGAAACACCCGGCGCCGGAAAAGCAGTGAAAGTGTCGGAGCCGATGAAGAAAAGTCGCCGAGGACCACGCTCGCGTAGCTCACAGTATCGAGGAGTTACTTTCTACAGAAGAACTGGTAGATGGGAATCTCATATATGGGATTGTGGAAAGCAAGTGTATTTGGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCGTATGATAGAGCAGCTATTAAATTCCGGGGAGTGGAGGCAGACATCAACTTCAACATCGAAGACTATGAGGAAGACTTGAAGCAGATGACCAATTTAACCAAGGAAGAGTTTGTCCACGTACTTCGCCGACAAAGCACTGGATTTCCCAGAGGAAGCTCCAAATATAGAGGTGTAACTTTGCACAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAATTTTTGGGCAAAAAGTATGTTTATCTGGGTCTGTTTGACACCGAAATTGAAGCTGCAAGGGCATATGATAAAGCAGCAATAAAATGTAATGGCAAGGAGGCTGTCACCAATTTTGATCCTAGCATCTATGATAGTGAGCTTAATTCTGAATCCTCAGGAGGTGTAGCTGCAGATCACAATTTGGATTTGAGTTTGGGCAATTCCAGCTCTAAACATAACAATAGTCAAACATCGGGGAATCACTTCGCAAATTCTGCAACCGATCAGCATATGCCACCTGAATCTAATTGGCGGAATGGGGGAAGCAAGCCTAAGGTTCATCTGGTAAATATACTTCCAAAACCATGTGGTAGAAGCAACATAGAAGCCTATGGGCACGGTGAGAGTGAAACCTTGAGGTTGCTAAGCCAAACTCACCTTCAATCCCCTACCAATAAAGAAATGCACAGATATGGTCCGTATAGGTCGCCAGCAGAGCCACAAAAGCCTCACAATTTTGCACATCATCTTCACCAACCAAGTTTTCATGTTCCTAGCAGCAGCAGCAATGGAGGCCGTATTGGAAGCGATCTTTCGTTATCAATGTCCGATCAACAACAATGGCAAGCCGGGCCTCCACATTTGTTAGCAACTGCTGCAGCATCATCAGGATTCCCACAGCAAATTAGACCCTCCCAAGGTTGGCTGCAGAAAAATGGGTTCCACTCTCTCATGAGACCCTCATGA 1518 0.4717 MWNLNDSPDQRKDYESEGCSSSLNDDKGKRVGSASNSSSSAVVVEDGSEEEDSERGGSRTLDKKTNKIFGFAVAHDDSDHPPVTHQFFPVEDSELPVSAAAAGSGGGGGGSSFPRAHWVGVKFCQSETPGAGKAVKVSEPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYDSELNSESSGGVAADHNLDLSLGNSSSKHNNSQTSGNHFANSATDQHMPPESNWRNGGSKPKVHLVNILPKPCGRSNIEAYGHGESETLRLLSQTHLQSPTNKEMHRYGPYRSPAEPQKPHNFAHHLHQPSFHVPSSSSNGGRIGSDLSLSMSDQQQWQAGPPHLLATAAASSGFPQQIRPSQGWLQKNGFHSLMRPS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00492 505 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 503 - -
Gma11g00492 505 MobiDBLite consensus disorder prediction 8 24 - -
Gma11g00492 505 MobiDBLite consensus disorder prediction 438 466 - -
Gma11g00492 505 SUPERFAMILY DNA-binding domain 153 211 IPR016177 GO:0003677
Gma11g00492 505 MobiDBLite consensus disorder prediction 326 360 - -
Gma11g00492 505 ProSiteProfiles AP2/ERF domain profile. 154 210 IPR001471 GO:0003700|GO:0006355
Gma11g00492 505 MobiDBLite consensus disorder prediction 26 44 - -
Gma11g00492 505 ProSiteProfiles AP2/ERF domain profile. 246 303 IPR001471 GO:0003700|GO:0006355
Gma11g00492 505 PRINTS Ethylene responsive element binding protein signature 247 258 IPR001471 GO:0003700|GO:0006355
Gma11g00492 505 PRINTS Ethylene responsive element binding protein signature 285 305 IPR001471 GO:0003700|GO:0006355
Gma11g00492 505 SUPERFAMILY DNA-binding domain 245 305 IPR016177 GO:0003677
Gma11g00492 505 Gene3D AP2/ERF domain 153 212 IPR036955 GO:0003700|GO:0006355
Gma11g00492 505 Gene3D AP2/ERF domain 245 304 IPR036955 GO:0003700|GO:0006355
Gma11g00492 505 MobiDBLite consensus disorder prediction 313 367 - -
Gma11g00492 505 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 1 503 - -
Gma11g00492 505 SMART rav1_2 154 216 IPR001471 GO:0003700|GO:0006355
Gma11g00492 505 SMART rav1_2 246 309 IPR001471 GO:0003700|GO:0006355
Gma11g00492 505 CDD AP2 154 211 IPR001471 GO:0003700|GO:0006355
Gma11g00492 505 MobiDBLite consensus disorder prediction 428 466 - -
Gma11g00492 505 Pfam AP2 domain 154 202 IPR001471 GO:0003700|GO:0006355
Gma11g00492 505 Pfam AP2 domain 245 294 IPR001471 GO:0003700|GO:0006355
Gma11g00492 505 CDD AP2 245 305 IPR001471 GO:0003700|GO:0006355
Gma11g00492 505 MobiDBLite consensus disorder prediction 130 154 - -
Gma11g00492 505 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00492 Gma-Chr11 4107752 4111440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00492 1 340 AP2-EREBP Transcription Factor Family AT4G36920 69.774 1.50e-141 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gma11g00492 AP2 3.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00492 K09284 - gmx:100786333 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01912 01 54652859 54656513 Gma11g00492 11 4107752 4111440 GST
Gma11g00492 11 4107752 4111440 Gma17g01567 17 16240278 16244669 PCT
Gma11g00492 11 4107752 4111440 Gma05g00933 05 24511252 24513247 PCT
Gma17g01567 17 16240278 16244669 Gma11g00492 11 4107752 4111440 PCT
Gma05g00933 05 24511252 24513247 Gma11g00492 11 4107752 4111440 PCT