Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00481 ATGGAACCAGCTTCAGCTGATTCTTCATCTCAACCTACTCCTCCAGCTTCTAATACTGAAGATCGGCACTCAACCAAAGCGTCTGGACAAACTGGCAATGCACATGATTCACAATTGTCATCACCCACTTCTGGCATATCATCCTGGGCAAGAAATCTGAAATTCCCACAGGCCCTTGGGCTTGGAGGAGCACAACAGAACTCCCAGGCCCAAAACGCTGGCATGTCAGCTTTTGCTCGCCTGACTGGTGGGCTTGGATTGCAAACGCTATCAAATGAAACTGCTCCAGTCAAGTCAGGAACCGAGCAATCTAACTTACTTGAATCCGTCACCAAAGGCTTGGTGGACTCTTCCAAGAGTGCAGTAAAGGCGGTGCAGGTCAAAGCTCGCCATATTGTCTCTCAAAATAAACGTAGATACCAGGAAGATGGATTTGATTTGGACATGACATACATCACTGAAAATATAATTGCTATGGGATTTCCGGGTGGTGATTTTAGCTCTGGAATTTTTGGATACATTGAGGGGTTCTATCGCAATCACATGGATGAAGTGATCAAGTTTTTTGAAACACATCATAAGGGAAAGTACAAAGTATACAATCTTTGTTCAGAAAGGTTATATGACGGATCATTATTCCAGGGGAAGGTTGCAACTTTCCCATTTAGTGATCATAATTGCCCTCCTATTCAACTTATAGCATCATTTTGTCAAAGTGCATATTCATGGTTGAAGGAGGATATTCAAAATGTGGTGGTTGTTCATTGTAAAGCTGGTATGGGGAGGACTGGACTGATGATATGTAGTCTTCTTTTATTTCTTAAGGCAAGTCATGATAATCAACTTCAAAGACTTTGGAATTTCTTCCCAACTGCAGAGGAAGCTATTGATTACTTTAACCATAAAAGATGTGTAGATGGAAAGGCTCTAATCCTCCCTAGTCAGATTAGATATGTAAAATACTTTGAACGGACTTTAACACACTTCAATGGAGAAGTCCAGCCAGGACGAAGgtgcatgctaagagggtttcggcttcacgaatgcccttattgGGTTAGACCATCTATTACAATTTCTGATCATAAGGGAATTCTTTTTACCACAAGAAAGCATCCCAAAACAAAGGATCTAATGCCAGAAGATTTCTGGATCAGTGCACCAAAGAAAGGAATTGTGGTTTTTGCCCTACCAGGAGAGCCTGGTCTAACAGAGTTGGTAGGAGACTTCAAAATTCAGTTTCAAGATCGACAGGGAGATTTCTACTGTTGGATGAATACAACATTGACAGAAAACCGAAAAATTTTGGATGGTTCAGATTTTGATGGTTTCGACAAGAGAAAGATCCCTGCTCCAGGATTCAAGGTGGAAATTGTGATGATAGGGTATAATGCCATCCTACCTGCAAATACAAAATCGAATCCTGCCAGCAAAGGATCTGATGGAAACACAAGCAATGCCCTACCTGGTCTAAAGCATACTACATCTAATTCAAGTGAGAGTGAAGTCCCTAGAAATGGAGATGATGATGTATTCTCAGACAGTGACGAAGAGGAGACCCGGGATACACAAAGCACGAAAGCTGCAACTGAGTACAAATTTATGGCACCTCATCAAGTATCTGAGACAACAACTGACCATGTAGGGATGTTGACACACAAAACGGATCAGTTGTCACTACAACAAGAGGAACGCAAGCAAAACGTTGCTTCTGAAGAATCAGATACAGATAAACTTCATAAAAATCATACAGGCAATAACAGTATAAACATGGGATCTGTAGGGGCAAGTGACATCAAGGCAATCGCGGCAGATGCTTCAGTTTTTTCCTTTGGAGATGAAGATTTTGAAAGTGACTGA 1860 0.4048 MEPASADSSSQPTPPASNTEDRHSTKASGQTGNAHDSQLSSPTSGISSWARNLKFPQALGLGGAQQNSQAQNAGMSAFARLTGGLGLQTLSNETAPVKSGTEQSNLLESVTKGLVDSSKSAVKAVQVKARHIVSQNKRRYQEDGFDLDMTYITENIIAMGFPGGDFSSGIFGYIEGFYRNHMDEVIKFFETHHKGKYKVYNLCSERLYDGSLFQGKVATFPFSDHNCPPIQLIASFCQSAYSWLKEDIQNVVVVHCKAGMGRTGLMICSLLLFLKASHDNQLQRLWNFFPTAEEAIDYFNHKRCVDGKALILPSQIRYVKYFERTLTHFNGEVQPGRRCMLRGFRLHECPYWVRPSITISDHKGILFTTRKHPKTKDLMPEDFWISAPKKGIVVFALPGEPGLTELVGDFKIQFQDRQGDFYCWMNTTLTENRKILDGSDFDGFDKRKIPAPGFKVEIVMIGYNAILPANTKSNPASKGSDGNTSNALPGLKHTTSNSSESEVPRNGDDDVFSDSDEEETRDTQSTKAATEYKFMAPHQVSETTTDHVGMLTHKTDQLSLQQEERKQNVASEESDTDKLHKNHTGNNSINMGSVGASDIKAIAADASVFSFGDEDFESD 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00481 619 MobiDBLite consensus disorder prediction 537 557 - -
Gma11g00481 619 ProSiteProfiles C2 tensin-type domain profile. 336 463 IPR014020 -
Gma11g00481 619 MobiDBLite consensus disorder prediction 474 502 - -
Gma11g00481 619 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 151 329 IPR029021 -
Gma11g00481 619 CDD PTP_PTEN 148 324 IPR045101 GO:0016791
Gma11g00481 619 Pfam Protein-tyrosine phosphatase 224 283 IPR000242 GO:0004725|GO:0006470
Gma11g00481 619 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 11 619 - -
Gma11g00481 619 PANTHER PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2B 11 619 - -
Gma11g00481 619 MobiDBLite consensus disorder prediction 1 45 - -
Gma11g00481 619 ProSitePatterns Tyrosine specific protein phosphatases active site. 254 264 IPR016130 GO:0016311|GO:0016791
Gma11g00481 619 MobiDBLite consensus disorder prediction 474 592 - -
Gma11g00481 619 ProSiteProfiles Phosphatase tensin-type domain profile. 138 329 IPR029023 -
Gma11g00481 619 MobiDBLite consensus disorder prediction 558 582 - -
Gma11g00481 619 Gene3D Protein tyrosine phosphatase superfamily 123 332 IPR029021 -
Gma11g00481 619 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 252 303 IPR000387 GO:0016311|GO:0016791
Gma11g00481 619 SMART PTEN_C2_2 334 462 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00481 Gma-Chr11 4023319 4030308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00481 37 619 Protein tyrosine phosphatase (PTP) family AT3G19420 60.473 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00481 K01110 - gmx:100807702 1194.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01924 01 54763914 54771491 Gma11g00481 11 4023319 4030308 GST
Gma11g00481 11 4023319 4030308 Gma10g02488 10 52267111 52276757 PCT
Gma11g00481 11 4023319 4030308 Gma20g01216 20 39010040 39016288 PCT