Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00464 ATGTTGGAGCTGTGCCGCAAGCCACTGAAGATGTGCTTCGGTGGTGGAGGCAACGATGATGACCTCCTCTGGCACACGGACCTTAAGCCCCACGCTTCAGGGAACTACTCAATTGCAGTGGTACAAGCTAATTCATCCTTGGAAGACCAAGCTCAAGTTTTCACCTCTCCCTCCGCAACCTTTGTTGGCGTATACGACGGACACGGTGGTCCTGAAGCTTCCCGTTTCATCACCAACCATCTCTTCTCCTTCCTTCGCAAATTCGCAACCGAGGAAGGTGATTTGTCGGAGGAAGTTATAAAGAAGGCGTTCGAGGCGACCGAGGAGGAGTTTTTGCGTGTAGTGAGGGAATCATGGATTGCGCGGCCACAGATAGCTTCAGTGGGTTCGTGTTGTCTTCTGGGAGCGATTTCAAAGGGAGTTCTTTATGTGGCTAATCTCGGGGATTCGAGGGCGGTTTTGGGTAGGAAAGCGTTGGAAGGAGAGGTGAATTGTGGTGCTGTGGTGGCAGAGCGTTTGTCCACTGATCATAATGTTGGGGTGGAGGAGGTTAGAAAGGAGGTTGAAGCTCTTCACCCTGATGATGCACACATTGTGGTTTGCATTGGTGGAGTTTGGCGAATCAAGGGCATTATTCAGGTCTCAAGATCAATTGGAGATGTTTACCTAAAGAAACCAGAATTTGACACTAATCCTCTGTTTCAACAATTTGTATGTCCACTATACTTGAAGAGACCTGTAATGACAGCTGAACCATCGATATTGAAGCGGAAATTGAAGGCAGATGATCTGTTTTTGATCTTTGCAACAGATGGACTTTGGGAGCATTTAACTGATGAAGTGGCTGTTGAAATCATCTCCAGAAGTCCCAGAATAGGAATAGCAAAACGATTGGTGAGAGCTGCACTAGAAGAGGTTGCAAAGAAAAGAGAAATGAGGTATGAGGATCTAAGAAAAACTGATAAAGGTCTAAGGCGTCATTTTCATGATGATATTACAGTGATCGTTCTATATCTCGATCATTCAAAAGAATCTCAAAATGGTAGATCAAAACAAAAAGGAGTTTATGATTGCATTAATACTCCTATTGATATCTTCTCTCTGAACTCAGATGAAGCTGATCTTTAA 1128 0.4477 MLELCRKPLKMCFGGGGNDDDLLWHTDLKPHASGNYSIAVVQANSSLEDQAQVFTSPSATFVGVYDGHGGPEASRFITNHLFSFLRKFATEEGDLSEEVIKKAFEATEEEFLRVVRESWIARPQIASVGSCCLLGAISKGVLYVANLGDSRAVLGRKALEGEVNCGAVVAERLSTDHNVGVEEVRKEVEALHPDDAHIVVCIGGVWRIKGIIQVSRSIGDVYLKKPEFDTNPLFQQFVCPLYLKRPVMTAEPSILKRKLKADDLFLIFATDGLWEHLTDEVAVEIISRSPRIGIAKRLVRAALEEVAKKREMRYEDLRKTDKGLRRHFHDDITVIVLYLDHSKESQNGRSKQKGVYDCINTPIDIFSLNSDEADL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00464 375 Gene3D - 25 351 IPR036457 -
Gma11g00464 375 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 3 374 - -
Gma11g00464 375 CDD PP2Cc 42 339 IPR001932 -
Gma11g00464 375 SMART PP2C_4 28 337 IPR001932 -
Gma11g00464 375 ProSiteProfiles PPM-type phosphatase domain profile. 35 339 IPR001932 -
Gma11g00464 375 PANTHER ALPHABET, ISOFORM E-RELATED 3 374 - -
Gma11g00464 375 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Gma11g00464 375 Coils Coil 300 320 - -
Gma11g00464 375 SUPERFAMILY PP2C-like 40 341 IPR036457 -
Gma11g00464 375 Pfam Protein phosphatase 2C 57 304 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00464 Gma-Chr11 3855400 3859399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00464 17 345 PP2C-type Phosphatase Gene Family AT3G51370 54.599 1.19e-137 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00464 - K01102 gmx:100802394 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01943 01 54906930 54910141 Gma11g00464 11 3855400 3859399 GST
Gma11g00464 11 3855400 3859399 Gma10g02449 10 52003770 52007074 PCT
Gma11g00464 11 3855400 3859399 Gma20g01259 20 39356352 39359338 PCT