Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00462 ATGGTTTATCTCGCCGTCGCTGGTGCCGGATACAGCTCAGTCGTCGGAATCAATAATCGGAGGCCAGAATTTTTCATATCAATTATACCAAACGGCGCCATTCCAACGCTCTATTTCGTCGCATCTCTGTGTCGGTGCTGCAGAGAACATGGCTTCAGTAGCGCTTCCGAATCCGCTTGGACAGATTTTCCCGTAGAGAACGCGTATGAGCTGTTAGGAGTGTCCGAGACCAGCTCCTTTGACGAGATTAAAGCGTCGTTTCGAAAATTGGCCAAAGAGACTCACCCGGACCTAGCTGAGTCAAAGAACGATTCCACTGCGTCTCGACGATTTGTACAAATTCTGGCTGCCTATGAGattctttcagattctcaaaagagagcccattatgacatgtacctgttgtctcagaaaaaacttatgcaaaggcatcctggacagggttcaaaattgcaaatttacaaatcacaggctactgcgttcaaggagatggaagttgttgaatggttaaaatggtacagattaactataaataatattttggcagaaaagaagatggtagttggaactggctattttgatgtatttgagagagatttttattcagctatttatgcagcatactatggtcctgaaattcagtccatggagcttcttcctgaCTGCTTTGAGGCTGAGGAGAGGTCCTCTTATGAAACTCCTGAGGTTTTGCACTTAGTTTCAGGACGTGATCTTTTCGGAATGGTTTGCCTAGCTAACAAGGTTCCAGAGATATCAATTACTAACAATGAGAAGTTAACATCTTTTAGATCCTTCCATTCAGGCCTGTGTCAATCTATAACAGATTTGAACGTCCACAAGAATGCAAAAAGATCAGATGATTTTGAAACTCACCGAGGTCACAGCTCTAAAACTTCAAGTATTGTATCAGATGCATATAGACATCTAGAATTGCACATCTCTGGAAGAGTGATTGCTACAGCATCTAGGGCCCTACCCAGATGCTGTTCTGATGAGATGCAGACAGAAGATACTGAAGATCATATTCATGTGTTCCTTAATTTATATGAAGATCCCAAACATATCAGCAGTGATTTTTGGAAAGATTACCTTGCAAATGGTGCAGTTGGAAGAAGAATTCACTTGGGAACCATATCTGGACTTGGGAGCAGTCCAGATGAAGGTTCTTGCTATGTCTACAATGACAAGGGTACAAAGACCCATGTGATTATGAAGCATAGAACATTGATGGTGAAGCATATGCATTGGTATGAAGTGAGTGAGAAAGTTTCAGTTTGTGAATGTAGATGCACTAGAGCACGCTTACCACCAAGCAAATTTTGGCTATTTGAGCCTCGTTGTGGCTTCCATGACATAGGGGGTTGGTACGTTGAAACATATGGCAAAGATAAGAATGGTCGTACAATGCCATCACAAAGGTTCTGGGATGGCTTGGACTATAGTGAGCAAGCTGACAGAAGACTTCATCCAGCAATAAACTTGTTCAATAGTTACAGAATGACTCTTGGGATGTTCTGGTTGGCTGCTGGTGCTGTTTTAATATATAAGGAACCAATATCATGCTTGAGCTGA 1593 0.3497 MVYLAVAGAGYSSVVGINNRRPEFFISIIPNGAIPTLYFVASLCRCCREHGFSSASESAWTDFPVENAYELLGVSETSSFDEIKASFRKLAKETHPDLAESKNDSTASRRFVQILAAYEILSDSQKRAHYDMYLLSQKKLMQRHPGQGSKLQIYKSQATAFKEMEVVEWLKWYRLTINNILAEKKMVVGTGYFDVFERDFYSAIYAAYYGPEIQSMELLPDCFEAEERSSYETPEVLHLVSGRDLFGMVCLANKVPEISITNNEKLTSFRSFHSGLCQSITDLNVHKNAKRSDDFETHRGHSSKTSSIVSDAYRHLELHISGRVIATASRALPRCCSDEMQTEDTEDHIHVFLNLYEDPKHISSDFWKDYLANGAVGRRIHLGTISGLGSSPDEGSCYVYNDKGTKTHVIMKHRTLMVKHMHWYEVSEKVSVCECRCTRARLPPSKFWLFEPRCGFHDIGGWYVETYGKDKNGRTMPSQRFWDGLDYSEQADRRLHPAINLFNSYRMTLGMFWLAAGAVLIYKEPISCLS 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00462 530 Gene3D DnaJ domain 58 155 IPR036869 -
Gma11g00462 530 CDD DnaJ 67 123 IPR001623 -
Gma11g00462 530 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Gma11g00462 530 SMART dnaj_3 66 126 IPR001623 -
Gma11g00462 530 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 48 503 - -
Gma11g00462 530 PRINTS DnaJ domain signature 106 126 IPR001623 -
Gma11g00462 530 PRINTS DnaJ domain signature 87 102 IPR001623 -
Gma11g00462 530 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gma11g00462 530 ProSiteProfiles dnaJ domain profile. 67 134 IPR001623 -
Gma11g00462 530 Pfam DnaJ domain 67 131 IPR001623 -
Gma11g00462 530 SUPERFAMILY Chaperone J-domain 65 138 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00462 Gma-Chr11 3836534 3841168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00462 69 133 C2H2 Transcription Factor Family AT1G74250 44.118 1.19e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00462 - - gmx:100801323 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01945 01 54924382 54929012 Gma11g00462 11 3836534 3841168 GST