Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00450 ATGAGTTGCAACGGGTGCCGCGTCCTTCGAAAGGGTTGCAGCGAGTCTTGTATTCTGCGGCCGTGTCTACAGTGGATCGATACGCCCGAAGCACAAGGCCATGCCACTGTCTTCGTTGCCAAATTCTTCGGTCGTGCCGACCTCATGTCCTTCATTTCTAACGTCCCCGAACCCCAAAGGCCCGCTCTGTTTCAATCTCTGTTGTTCGAAGCGTGTGGAAGAACAGTGAACCCTGTCAACGGTGCTGTGGGACTTTTGTGGACCGGAAACTGGCACGTGTGCCAGGCGGCGGTTGAGACGGTGCTCCGTGGCGGCACCGTCAGGCCCATGCCGGAGCTTTTCGGCCTAGACGCTCCCACTCCCACCACCGATGATGCCTCCGAAGGAGAAGTTACCTGTACCGACAAGTGGAGAGTCCGAGATCCGAACCCGAATTTCCGGTTCCCGGGTTCGAGGTCCGATAAGGGTAGTTCCGGCGGTAAACGCAAGCGATTTGAAGAGCTCGCCAAGCTTCAGACGGCGACGACGGATCTCAATCTCCGGCTGACGCCGAGTTTTCTGCAGAACGCGGCGAACTTCGGCTGCCGGCAGGAAATTCGCTGGCCGGGATCTCCGTCGATGAACTCCGAGGAGTCCGGGACGACGACAGCGTGTTTGGAGAGCGGGATCGGAGATCACTACGCTCCCGACGGAGACCGGAAAGTGCTGAACCTTTTCATTTGA 723 0.5823 MSCNGCRVLRKGCSESCILRPCLQWIDTPEAQGHATVFVAKFFGRADLMSFISNVPEPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTVRPMPELFGLDAPTPTTDDASEGEVTCTDKWRVRDPNPNFRFPGSRSDKGSSGGKRKRFEELAKLQTATTDLNLRLTPSFLQNAANFGCRQEIRWPGSPSMNSEESGTTTACLESGIGDHYAPDGDRKVLNLFI 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00450 240 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 240 - -
Gma11g00450 240 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 240 - -
Gma11g00450 240 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Gma11g00450 240 MobiDBLite consensus disorder prediction 141 162 - -
Gma11g00450 240 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00450 Gma-Chr11 3757934 3759228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00450 1 239 AS2 family AT3G49940 54.826 1.02e-81 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma11g00450 LOB 6.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00450 - - gmx:100802764 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01956 01 55016586 55017936 Gma11g00450 11 3757934 3759228 GST
Gma11g00450 11 3757934 3759228 Gma10g02437 10 51923030 51924283 PCT
Gma11g00450 11 3757934 3759228 Gma20g01274 20 39450480 39452273 PCT
Gma17g01493 17 14398068 14399519 Gma11g00450 11 3757934 3759228 PCT