Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00446 ATGAAAGCTCGTCACTTGAGCTTCTTCTACCTCCACATCATCGTCTTCACACTCTCCCTATCCCTACCCATACAAGTCAACACTGCAAAAGGGATCAACAACACCATCACGAATGAATCTGGCAATAATAGAAGAATCCTGCACCAGCCATTGTTCCCGGCGAGTTCCGCTCCCCCGCCAGCAGGCACGGCGTCTCCACCACCGTCTACACCGGTGGTGGAAACTCCTCCCTCTCCGGACGGCGGCAACAACATCCCCTTCTTCCACGAGTACCCGGCGGGCCCCCCGGCGGATCAGAACCAACACGCAGCACCGTCGTCCACGGTGAACTCCACAATCGCAAACCCAACGGCAACACAGCCGACAAAGGGAACAAAAAAAGTAGCAATCGCGATCTCAGTGGGAATTGTGACGCTTGGGATGCTCTCGGCACTCGCTTTCTTTTTATACAAACACAGAGCAAAACACCCCGTGGAGACTCAAAAACTCGTGGCTGCTGGAAGTGGGAACAACAATAACTCAAACAGGAACAGCAACGAGGTTGCAAACACAACCTCGGCACCGTCGAGTTTCCTCTACATTGGGACCGTGGAGCCCACGGACTCACGAGATAATAGAAATGCTATTAAGCCCAACAGATCGCCGTATCACAAACTCAAGCGATCCGATCGCTACCGGCCGAGTCCCGAATTACAGCCAATGCCGCCGCTCACTAAGCCTCCCGACGGGAATTACCCGCCGGCGGTGTCTTCCTCGTCGGACTCCGACGAGGAGAGCCGCGATACGGCGTTTCATTCGCCGCAGAACTCGTCCGTCGATGGATATTACACGCCGGCTTCACGGCATAGCTCTCTGGTTAATGGTAGTCCTGCGAAGAAAGAAACGAATTCCACTCCCACACCCGTTGCTGTTCCGTTCTCCAAGAGAACTTCGCCCAAGTCACGCGTTTCGGCACCCTCGCCGGAGATTAGACACGTCATCATACCTTCCATAAAGCAGCCTCCACCACAGTCGCCGCCGCCACCTAAGCATTCGAGAAAGCCGAAATTCTCGGCGCCTCCCCCACCTCCGAATTTGAAGCGTCTTCAGTCAACAAAAACAACCGACACTGCTTTGCACGTGTCAAGGACTTCACTTAAtcctcctcctccaccacctcctcctccgccaccacctccaccgcTGCAGCGAAAATCAGTGTCTCCGGCGGTTAGTGCTTCCTCTACTACTTGTGCATCTGTAAAGCGACAATCTTGGTCACCAATTCAATGTAGTGTGACGAATGTTTCTGAGGAGGTGGAGCAAAGTCAAAGTGTGAGCTCTTCCGAGAGGCATGAAGCCAATGACACGGATGGAGCCAAACCAAAACTGAAAGCTCTGCATTGGGATAAAGTGCGTGCGACCTCAGACCGTGCTACTGTGTGGGACCAGATCAAATCAAGCTCCTTTCAGTTAAATGAAGACATGATGGAATCGTTGTTTGGATGCAAAGCCACAAATTCTGCACCGAAAGAACCTCCAAGAAAAAAATCAGTTCTTCCTTTCGTTGATCAGGAGAACAGGGTGTTAGACCCGAAGAAGTCACAGAACATAGCTATTCTTCTCAGGGCTTTGAATGTGACAAAAGATGAGGTGTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGCTTGGGCACTGAGCTGTTGGAAACCCTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAACTCAAAAACTATGATGGTGATCTCTCAAAACTTGGATCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTTTCGCCTTTAAACGAGTTGAAGCTATGCTATATAGAGCCAACTTTGATGCAGAAGTTAACTACCTTAGAAAGTCTTTTCAAACCATGGAGgctgcaagtgaggaattaaagaacagccggttattcctcaaactccttgaagctgttctaaggacaggaaacagaatgaatgttggaactaaccgaggggatgctaaagcTTTCAAATTGGACACACTTCTAAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTCCACTTTGTGGTCCAAGAAATCATTAGATCTGAAGGTGCTGGAGCTGAATCTGCAAATGATAATGTGAAGATGGATTCCAAATTTAATGAAGATGAGTTTAAGAAGCAAGGCTTGCAGGTTGTGGCAGGGCTCAGTAGAGATCTTAGTGATGTAAAAAAAGCAGCCGGAATGGATTCAGATGTCTTGAGCAGCTATCTTTCAAAGCTTGAAACAGGGCTTGATAAAGTGCGATTGGTTTTCCAATATGAAAAGCCAGATATGCAAGGCAATTTCTTTAACTCCACAAAGCTATTTCTGAAATATGCTGAAGATGAAATTGTACGGATTAAAGCAGATGAGAGAAAAGCCTTGTACCTTGTAAAAGAAGTTACTGAATACTTTCATGGGAATGCAACAAAGGAAGAAGCCCACCCTCTCAGAATTTTCATGATTGTAAGAGACTTTTTGAATATCTTGGATCTAGTGTGCAAAGAAGTGGAAAAGATGCATGATAGAATTGTTGGTGGTTCTGGCAGATCTTTCCGAATACCTCCAAATGCATCATTACCTGTTGTCAACAGGTACAATCATCGAAAGCAAGATAGAAGCTCAGATGAGGAAAGCTCATCTCCCTAG 2688 0.4446 MKARHLSFFYLHIIVFTLSLSLPIQVNTAKGINNTITNESGNNRRILHQPLFPASSAPPPAGTASPPPSTPVVETPPSPDGGNNIPFFHEYPAGPPADQNQHAAPSSTVNSTIANPTATQPTKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKHPVETQKLVAAGSGNNNNSNRNSNEVANTTSAPSSFLYIGTVEPTDSRDNRNAIKPNRSPYHKLKRSDRYRPSPELQPMPPLTKPPDGNYPPAVSSSSDSDEESRDTAFHSPQNSSVDGYYTPASRHSSLVNGSPAKKETNSTPTPVAVPFSKRTSPKSRVSAPSPEIRHVIIPSIKQPPPQSPPPPKHSRKPKFSAPPPPPNLKRLQSTKTTDTALHVSRTSLNPPPPPPPPPPPPPPLQRKSVSPAVSASSTTCASVKRQSWSPIQCSVTNVSEEVEQSQSVSSSERHEANDTDGAKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCKATNSAPKEPPRKKSVLPFVDQENRVLDPKKSQNIAILLRALNVTKDEVSEALLDGNPEGLGTELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDAEVNYLRKSFQTMEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAGAESANDNVKMDSKFNEDEFKKQGLQVVAGLSRDLSDVKKAAGMDSDVLSSYLSKLETGLDKVRLVFQYEKPDMQGNFFNSTKLFLKYAEDEIVRIKADERKALYLVKEVTEYFHGNATKEEAHPLRIFMIVRDFLNILDLVCKEVEKMHDRIVGGSGRSFRIPPNASLPVVNRYNHRKQDRSSDEESSSP 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00446 895 PRINTS Proline rich extensin signature 221 233 - -
Gma11g00446 895 PRINTS Proline rich extensin signature 235 251 - -
Gma11g00446 895 PRINTS Proline rich extensin signature 301 322 - -
Gma11g00446 895 PRINTS Proline rich extensin signature 338 355 - -
Gma11g00446 895 PRINTS Proline rich extensin signature 381 406 - -
Gma11g00446 895 MobiDBLite consensus disorder prediction 361 377 - -
Gma11g00446 895 PANTHER FORMIN-RELATED 2 895 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma11g00446 895 MobiDBLite consensus disorder prediction 203 227 - -
Gma11g00446 895 MobiDBLite consensus disorder prediction 165 202 - -
Gma11g00446 895 MobiDBLite consensus disorder prediction 400 420 - -
Gma11g00446 895 MobiDBLite consensus disorder prediction 53 75 - -
Gma11g00446 895 ProSiteProfiles Formin homology-2 (FH2) domain profile. 447 869 IPR015425 -
Gma11g00446 895 SMART it6_source 447 858 IPR015425 -
Gma11g00446 895 PANTHER FORMIN-LIKE PROTEIN 2 895 - -
Gma11g00446 895 MobiDBLite consensus disorder prediction 50 125 - -
Gma11g00446 895 Pfam Formin Homology 2 Domain 450 843 IPR015425 -
Gma11g00446 895 MobiDBLite consensus disorder prediction 264 317 - -
Gma11g00446 895 MobiDBLite consensus disorder prediction 432 456 - -
Gma11g00446 895 MobiDBLite consensus disorder prediction 332 360 - -
Gma11g00446 895 SUPERFAMILY Formin homology 2 domain (FH2 domain) 383 854 - -
Gma11g00446 895 MobiDBLite consensus disorder prediction 100 125 - -
Gma11g00446 895 MobiDBLite consensus disorder prediction 165 420 - -
Gma11g00446 895 MobiDBLite consensus disorder prediction 229 243 - -
Gma11g00446 895 MobiDBLite consensus disorder prediction 378 398 - -
Gma11g00446 895 Gene3D Formin, FH2 domain 443 855 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00446 Gma-Chr11 3685670 3690895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00446 35 885 FH2 protein (formin) Gene Family AT5G67470 56.969 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00446 - - gmx:100798670 1595.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01961 01 55093047 55097863 Gma11g00446 11 3685670 3690895 GST
Gma11g00446 11 3685670 3690895 Gma17g01487 17 14246187 14250519 PCT
Gma11g00446 11 3685670 3690895 Gma05g01061 05 30327054 30331571 PCT
Gma17g01487 17 14246187 14250519 Gma11g00446 11 3685670 3690895 PCT
Gma05g01061 05 30327054 30331571 Gma11g00446 11 3685670 3690895 PCT