Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00443 atgatggagagttatttaaatgaGAATTTTGAAGTGAAGTCCAAAAATTCATCTGAAGAGGCTCTTCAACGATGGAGGAGACTATGCAGGGTCGTGAAGAACCCCAAAAGACGCTTTCGTTTCACTGCAAATCTCTCCAAGAGGGGCGAAGCTGCTGCTATGCGTCGTACCAATCagGAGAAGATCAGGGTTGCAGTTTTGGTTTCCAAAGCAGCACTTCAATTTATCCTAGGTGTGCAACTAAGCGATTACAAAGTGCCAGAGGAAGTTGAAGATGCAGGTTTTGAAATCTGCGGCGATGAATTGGGGTCTATTGTTGAAGGCCATGATGTAAAGAAGTTCAGACATCATGGTGGGGTTAATGGCATTGCTGAGAAGCTTTCTACATCAACCACTGAGGGGCTTAACAATGATACCGAGTTACTGAATAGGAGACAGCAGATATATGGAATCAACAAATTCACTGAAAGTGCAGCTACAAGTTTCTGGGTTTTTGTTTGGGAAGCCTTTCAAGACATGACTCTGATGATACTTGGAGTGTGTGCTATTGTGTCACTGCTAGTTGGCATTGCAACTGAAGGATGGCCAAAGGGGGCTCACGATGGTCTTGGAATTGTTGCAAGTATATTGCTTGTTGTCTTTGTGACAGCAACGAGCGATTATCGCCAATCGTTACAGTTCAGGGATTTAGACAAGGAGAAGAAGAAAATTTCCATTCAGGTCACAAGAAATGGATACAGACAGAAAATGTCAATATATGAATTACTTCCTGGTGACATTGTGCACCTTGCCATTGGTGATCAAGTCCCTGCTGATGGACTATTTGTCTCAGGATTTTCCGTATTGATTGATGAGTCAAGCTTAACAGGAGAGAGTGAGCCAGTGATGGTGAGTTCAGAAAATCCATTTCTTCTTTCTGGAACAAAGGTCCAAGATGGATCATGCAAGATGCTGGTCACCAGTGTTGGCATGAGGACTCAATGGGGTAAGTTGATGGCTACTCTCAGTGAAGGTGGAGATGATGAAACCCCACTACAGGTGAAGTTGAATGGTGTTGCAACAATTATTGGCAAGATAGGCCTATTCTTTGCAGTGGTTACTTTTGCAGTTCTGGTGCAAGGACTTGTAAGCCAAAAACTCCAACAAGGAAGCTTACGGAGCTGGACCGGTGACGATGCGTTGGAACTGTTGGAGTTCTTTGCAGTTGCAGTTACCATAGTCGTTGTTGCTGTTCCGGAGGGGCTGCCACTAGCTGTGACACTGAGCCTTGCATTTGCAATGAAGAAAATGATGAATGACAAAGCCCTTGTGAGACATTTGGCAGCATGTGAGACCATGGGATCAGCCACAACTATATGTAGTGACAAGACTGGGACACTAACAACCAACCACATGACTGTTGTCAAAACATGCTTTTGCTTGAACAGCAAGGAAGTGAGCAGCAATAAGGATTCTTCTAGTTTGTGCTCTGAACTCCCAGAACCTGCTGTGAAACTTCTACAACAGTCAATATTCAACAATACAGGAGGAGAGGTTGTGATTAACCAAAATGGCAAACGTGAGATTCTAGGAACTCCAACCGAGGCTGCAATATTGGAGTTTGGTTTGTCATTAGGTGGAGATTTTCAAGGAGAGAGACAAGCATGTAAACTTGTTAAAGTTGAGCCATTCAATTCCACCAAAAAGAAAATGAGTGTGGTGGTTGAGCTCCCTGGTGGAGGCTTAAGAGCCCACTGCAAAGGTGCTTCTGAAATAATTCTGGCTGCTTGTGACAAAGTTCTCAACTCAAACGGTGAGGTTGTACCCCTTGATGAAGAATCAACTAACCATCTTAAGGATACAATAAACCAGTTTGCAAGTGAGGCCCTTAGAACTCTATGCCTTGCCTATGTGGAATTGGAAAACGGGTTCTCTACTGAAGACCCTATTCCTGTTTCTGGATATACATGCATAGGAGTTGTTGGTATAAAAGATCCTGTTCGTCCCGGTGTTAAGGAATCTGTGGCAATGTGTCGTTCAGCTGGAATAACAGTTAGAATGGTTACTGGTGACAACATTAACACTGCAAAGGCTATAGCCAGGGAGTGTGGGATTTTAACTGATGATGGCATAGCTATTGAAGGTCCAGAGTTTAGAGAGAAGAGTCAGAAAGAGTTGCTTGAACTGATTCCCAAAATTCAGGTTATGGCTCGATCCTCACCTTTAGACAAACACACATTGGTGAAACACTTGCGTACTACTTTTGGGGAAGTGGTAGCTGTAACAGGTGATGGAACTAATGATGCCCCAGCCCTTCATGAAGCTGACATTGGACTTGCAATGGGAATTGCTGGAACTGAGGTTGCAAAAGAAAGTGCAGATGTCATAATTCTGGATGATAACTTCTCCACGATAGTAACAGTGGCCAAATGGGGACGTTCGGTTTACATAAATATTCAGAAATTCGTACAGTTTCAGTTAACTGTTAATGTGGTTGCATTAATAGTGAATTTCACATCAGCCTGCTTAACAGGAACTGCACCCCTCACAGCTGTTCAACTCTTGTGGGTGAACATGATAATGGACACACTGGGAGCACTTGCTCTTGCTACTGAACCTCCAAATGATGATTTAATGAAACGTTCACCTGTTGGAAGGAAGGGAAATTTCATCAGCAATGTCATGTGGAGGAACATCTTAGGTCAATCCTTGTATCAGTTTATGGTGATATGGTTTCTTCAGTCAAGAGGAAAATCAATCTTTTTACTTGAGGGCCCCAATTCAGATCTAGTCTTAAACACGCTTATTTTTAACACGTTTGTCTTCTGCCAGGTTTTCAATGAGATAAATTCACGTGAAATGGAGAAAATAAACGTTTTTAAAGGCATATTGGATAACTATGTTTTCGTGGGTGTCATCAGTGCTACTGTTTTCTTCCAAATCATAATAGTTGAGTACTTGGGAACCTTTGCAaacacaacacctctcaccctggcacagtggttcttttgcttgttggttggatttttGGGCATGCCAATTGCTGCTCGCTTAAAGAAGATCCCTGTTTGA 3051 0.4172 MMESYLNENFEVKSKNSSEEALQRWRRLCRVVKNPKRRFRFTANLSKRGEAAAMRRTNQEKIRVAVLVSKAALQFILGVQLSDYKVPEEVEDAGFEICGDELGSIVEGHDVKKFRHHGGVNGIAEKLSTSTTEGLNNDTELLNRRQQIYGINKFTESAATSFWVFVWEAFQDMTLMILGVCAIVSLLVGIATEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFRDLDKEKKKISIQVTRNGYRQKMSIYELLPGDIVHLAIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVSSENPFLLSGTKVQDGSCKMLVTSVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLVSQKLQQGSLRSWTGDDALELLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKTCFCLNSKEVSSNKDSSSLCSELPEPAVKLLQQSIFNNTGGEVVINQNGKREILGTPTEAAILEFGLSLGGDFQGERQACKLVKVEPFNSTKKKMSVVVELPGGGLRAHCKGASEIILAACDKVLNSNGEVVPLDEESTNHLKDTINQFASEALRTLCLAYVELENGFSTEDPIPVSGYTCIGVVGIKDPVRPGVKESVAMCRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFREKSQKELLELIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFTSACLTGTAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRSPVGRKGNFISNVMWRNILGQSLYQFMVIWFLQSRGKSIFLLEGPNSDLVLNTLIFNTFVFCQVFNEINSREMEKINVFKGILDNYVFVGVISATVFFQIIIVEYLGTFANTTPLTLAQWFFCLLVGFLGMPIAARLKKIPV 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00443 1016 PANTHER CALCIUM-TRANSPORTING ATPASE 1 5 1015 - -
Gma11g00443 1016 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 49 IPR024750 GO:0005516
Gma11g00443 1016 Pfam E1-E2 ATPase 237 431 - -
Gma11g00443 1016 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1015 IPR023298 -
Gma11g00443 1016 Gene3D - 17 77 - -
Gma11g00443 1016 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 110 1016 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Gma11g00443 1016 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 726 841 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma11g00443 1016 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 395 489 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma11g00443 1016 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 547 700 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma11g00443 1016 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
Gma11g00443 1016 PRINTS H+-transporting ATPase (proton pump) signature 611 629 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma11g00443 1016 PRINTS H+-transporting ATPase (proton pump) signature 755 771 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma11g00443 1016 PRINTS H+-transporting ATPase (proton pump) signature 787 812 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma11g00443 1016 CDD P-type_ATPase_Ca_PMCA-like 142 888 - -
Gma11g00443 1016 SFLD Haloacid Dehalogenase 435 807 - -
Gma11g00443 1016 Gene3D - 140 336 - -
Gma11g00443 1016 PANTHER CATION TRANSPORTING ATPASE 5 1015 - -
Gma11g00443 1016 Gene3D - 463 659 IPR023299 GO:0000166
Gma11g00443 1016 SFLD p-type atpase 435 807 IPR044492 -
Gma11g00443 1016 Pfam Cation transporting ATPase, C-terminus 840 1013 IPR006068 -
Gma11g00443 1016 Pfam Cation transporter/ATPase, N-terminus 116 185 IPR004014 -
Gma11g00443 1016 SUPERFAMILY HAD-like 451 860 IPR036412 -
Gma11g00443 1016 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Gma11g00443 1016 Gene3D - 450 800 IPR023214 -
Gma11g00443 1016 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Gma11g00443 1016 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Gma11g00443 1016 PRINTS P-type cation-transporting ATPase superfamily signature 652 663 - -
Gma11g00443 1016 PRINTS P-type cation-transporting ATPase superfamily signature 674 684 - -
Gma11g00443 1016 PRINTS P-type cation-transporting ATPase superfamily signature 755 774 - -
Gma11g00443 1016 PRINTS P-type cation-transporting ATPase superfamily signature 779 791 - -
Gma11g00443 1016 SMART Cation_ATPase_N_a_2 114 190 IPR004014 -
Gma11g00443 1016 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 664 IPR023299 GO:0000166
Gma11g00443 1016 Gene3D - 168 1004 - -
Gma11g00443 1016 Pfam Cation transport ATPase (P-type) 515 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00443 Gma-Chr11 3652913 3660119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00443 2 1016 Primary Pumps ATPases AT4G37640 81.594 0.0 1710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00443 K01537 - gmx:100792691 1965.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01965 01 55130620 55135605 Gma11g00443 11 3652913 3660119 GST
Gma11g00443 11 3652913 3660119 Gma17g01486 17 14239442 14244122 PCT
Gma11g00443 11 3652913 3660119 Gma05g01062 05 30333187 30337707 PCT
Gma17g01486 17 14239442 14244122 Gma11g00443 11 3652913 3660119 PCT
Gma05g01062 05 30333187 30337707 Gma11g00443 11 3652913 3660119 PCT