Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00437 ATGGATACCACGTTGTTTAGAGTAGTGAGTAGTTTCCAACATCACCAAGCTGATCAAGATCATCAATCCCTCAACAACTCCACCACAAGCAGCAGCTCTCGATCCTCCAGACAAGAGCAAAACTATCCCTACCCACAAGAACACGACGAAGAATGCTTCAACTTTTTCATGGATGATGAAGACTTATCCTCGTCTTCTTCCAAGCACTACTATCCCTATCAACCCCACCCTCCCTCCACTACCGACCATTCCTTCTCCCCCACTCCCGGCGTCGACGTTGTCTTCCCCTTCGAGTTCTCCTCCGGAAAGTGGGCCCAGGACATCCTCCTCGAAACCGCACGTGCCGTTGCCGACAAGAACACCACCCGCCTTCAACAACTCATGTGGATGCTAAACGAGCTCAGCTCCCCCTACGGCGACACCGACCAGAAACTAGCCTCGTACTTCCTCCAAGCCTTCTTCAGCCGCATCACCCAAGCCGGGGACCGAACCTACAAAACCTTAGCTTCAGCTTCCGAGAAAACATGCTCCTTCGAATCAACCCGCAAGACGGTGCTGAAGTTCCAAGAGTTGAGTCCCTGGACAACCTTCGGCCACGTGGCATCCAATGGCGCCATCTTAGAAGCCTTGGAAGGAGAGCCCAAACTACACATAGTTGACATCAGCAACACCTATTGCACCCAATGGCCAACCCTCTTCGAAGCCTTGGCAACTCGAAACGATGACACTCCGCATCTCCGTTTAACCTCCGTCGTCACCGCCGGCGCCACCGCGCAGAAGGTCATGAAGGAAATCGGAGCCAGAATGGAGAAATTCGCCAGACTCATGGGCGTGCCCTTTAAATTCAACGTCGTTCATCATGTAGGTCAACTCTCTGACCTCGATTTCAGTGTGCTAGATATTAAAGAAGACGAGGCGTTGGCGATTAACTGTGTTAACACCTTGCATTCGATCGCCGCCGTGGGGAACCACCGTGACGCGGTTATATCTTCGTTGAGGAGGTTGAAACCGAGGATCGTGACGGTGGTGGAGGAGGAGGCTGATTTGGACATTGGATTGGAAGGGTTTGAGTTCGTGAAAGGGTTTGAAGAGTGTTTGAGGTGGTTTAGGGTTTACTTTGAGGCCTTGGACGAGAGTTTTCCGCGGACGAGCAACGAGCGTTTGATGCTTGAGAGGGCGGCGGGGAGGGCGGTGGTGGACCTGGTGGCGTGTTCTCCGGCGGATTCCGTAGAGAGGCGGGAGAAGGCGGCGCGGTGGGCGAGGAGGATGCATGGAGGTGGGGGGTTCAATACGGTGGCGTTTAGCGAAGAGGTATGCGATGATGTGAGGGCGTTGTTGAGGAGGTATAGGGAAGGGTGGGCAATGACACAGTGCTCCGACGCCGGAATATTCCTGACGTGGAAGGAGCAGCCGGTGGTGTGGGCCAGTGCATGGAGGGCCTTGACGTAG 1449 0.5431 MDTTLFRVVSSFQHHQADQDHQSLNNSTTSSSSRSSRQEQNYPYPQEHDEECFNFFMDDEDLSSSSSKHYYPYQPHPPSTTDHSFSPTPGVDVVFPFEFSSGKWAQDILLETARAVADKNTTRLQQLMWMLNELSSPYGDTDQKLASYFLQAFFSRITQAGDRTYKTLASASEKTCSFESTRKTVLKFQELSPWTTFGHVASNGAILEALEGEPKLHIVDISNTYCTQWPTLFEALATRNDDTPHLRLTSVVTAGATAQKVMKEIGARMEKFARLMGVPFKFNVVHHVGQLSDLDFSVLDIKEDEALAINCVNTLHSIAAVGNHRDAVISSLRRLKPRIVTVVEEEADLDIGLEGFEFVKGFEECLRWFRVYFEALDESFPRTSNERLMLERAAGRAVVDLVACSPADSVERREKAARWARRMHGGGGFNTVAFSEEVCDDVRALLRRYREGWAMTQCSDAGIFLTWKEQPVVWASAWRALT 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00437 482 PANTHER PROTEIN SHORT-ROOT 1 479 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Gma11g00437 482 MobiDBLite consensus disorder prediction 14 42 - -
Gma11g00437 482 ProSiteProfiles GRAS family profile. 96 479 IPR005202 -
Gma11g00437 482 MobiDBLite consensus disorder prediction 14 44 - -
Gma11g00437 482 Pfam GRAS domain family 107 479 IPR005202 -
Gma11g00437 482 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 479 IPR005202 -
Gma11g00437 482 MobiDBLite consensus disorder prediction 66 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00437 Gma-Chr11 3614064 3615512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00437 4 479 GRAS Transcription Factor Family AT4G37650 60.566 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma11g00437 GRAS 8.2e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00437 - - gmx:100797072 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01971 01 55170589 55172019 Gma11g00437 11 3614064 3615512 GST
Gma11g00437 11 3614064 3615512 Gma17g01482 17 14199802 14201600 PCT
Gma11g00437 11 3614064 3615512 Gma05g01066 05 30441050 30442588 PCT
Gma17g01482 17 14199802 14201600 Gma11g00437 11 3614064 3615512 PCT
Gma05g01066 05 30441050 30442588 Gma11g00437 11 3614064 3615512 PCT