Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00418 ATGCTTTCTGCTCTTCCTTTTCAGGGAAACCCATTCCCGGCGTTGGACTACGCTTTCATGCCGTGGGATGGGCTTGACTCTTTGGGCTTCAAGCCCACCAGCCCCAATCCCGTCACTTCGAGTTCCGGCTCAGGCTACCCAAACCGAACCCATGCCGAAGAAAAACCGGCCTCGGACAAGTCGAACCACGTCACGTCCGTCATGGAGGAGCGGAAACGCAGGAGAATGATATCGAACCGGGAATCGGCCCGAAGGTCACGCATTCGTAAACAGAGACATCTTGAGAACTTACGGAACCAGATGAATCTATTTAGGGTTGAAAATCGAAAACTGAACAACGGGTTGCAGTTTCTCCTTCACCACTGTAACCGCCTGAGAACCGAAAACGAGTGGCTCCTGTCCGAACGACCCATGCTCCGTCAAAAACTAGCCAACATAAATCAAATTTTGCTTTTCCGACATTTGCAACCATTTTCCTCTGCATGGCCCTGCAATATTGTCTTGGCGGAATAA 513 0.5068 MLSALPFQGNPFPALDYAFMPWDGLDSLGFKPTSPNPVTSSSGSGYPNRTHAEEKPASDKSNHVTSVMEERKRRRMISNRESARRSRIRKQRHLENLRNQMNLFRVENRKLNNGLQFLLHHCNRLRTENEWLLSERPMLRQKLANINQILLFRHLQPFSSAWPCNIVLAE 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00418 170 MobiDBLite consensus disorder prediction 32 48 - -
Gma11g00418 170 PANTHER BZIP TRANSCRIPTION FACTOR 44 22 170 - -
Gma11g00418 170 Pfam bZIP transcription factor 71 130 IPR004827 GO:0003700|GO:0006355
Gma11g00418 170 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 69 132 IPR004827 GO:0003700|GO:0006355
Gma11g00418 170 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 74 89 IPR004827 GO:0003700|GO:0006355
Gma11g00418 170 MobiDBLite consensus disorder prediction 52 84 - -
Gma11g00418 170 MobiDBLite consensus disorder prediction 31 87 - -
Gma11g00418 170 PANTHER BZIP TRANSCRIPTION FACTOR 22 170 - -
Gma11g00418 170 CDD bZIP_plant_GBF1 72 123 IPR045314 GO:0003700|GO:0006355
Gma11g00418 170 SMART brlzneu 67 131 IPR004827 GO:0003700|GO:0006355
Gma11g00418 170 SUPERFAMILY Leucine zipper domain 71 123 IPR046347 GO:0003700|GO:0006355
Gma11g00418 170 Coils Coil 80 114 - -
Gma11g00418 170 Gene3D - 69 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00418 Gma-Chr11 3482861 3483610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00418 12 153 bZIP Transcription Factor Family AT3G49760 40.278 1.30e-29 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma11g00418 bZIP_1 6.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00418 - - gmx:102661188 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01988 01 55299320 55300059 Gma11g00418 11 3482861 3483610 GST
Gma11g00418 11 3482861 3483610 Gma17g01459 17 13897772 13898598 PCT
Gma11g00418 11 3482861 3483610 Gma05g01091 05 31154504 31155046 PCT
Gma17g01459 17 13897772 13898598 Gma11g00418 11 3482861 3483610 PCT
Gma05g01091 05 31154504 31155046 Gma11g00418 11 3482861 3483610 PCT