Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00417 ATGAAGCCTATAGAAAATGGCAATACCGTTAACATCAACTATCAAAATAGCTGGTTAGGCTTCTCCCTCTCCCCACAAATGATCAATATAGGTGTTCCTTCACACCTTCATCAGACACAGCCTTCACCCGCAGCTGTTGAAACTGTTCCACCAAGCTTTTATCATCATACACCTCTCCATAGCTATGGCTCTTACTATGGACTGGAAGGTGAACACGTTGGATTGAGTTCATCCTTGCCTATCATGCCCCTTAAATCCAATGTCTCTCTCTCTGGAATAGAAGCTCTGAGTAGATCACAAGCACAAGCAACGATAACTACTTCAGCAATGCATCCAAGGTTAAATAATATGCTTTACAACCAGCTCTTATGCCATGGACTAAACAATCCAAACAACTTAAATCACATTCAAGAGAATATCAGCCAGCAACAATTCTCGTATTACTCTACCTTAAGAAACCATGATATGATTTTAGAAGGTTCCAAGCACCAGCTCCCATGTATAGCTGAAGATGAAAATCCGGGTTTGAAGAGTTGGTTCTCAAGGGACTTCCCTGCTAGACATGGAGAAGAATCAAGGATGATTGTTCCTTTGGAGGACAATAATGGAGGCGAATCTGGATCCATTGGATCAATAACATATGGGGATTTGCATTCATTGAATTTGTCTGTGAGTCCTACCTCAGGATCAAGCTGTGTTACAAGTTCACCTGCTATCACTAATACTGTTGCCACTGATACCAAGAAAAGGGGGCTTCAAATGGTGGACCAGAATCAGAAGCAAATAGGTCATAGGAAATCCATAGATACCTTTGGGCAAAGAACATCTCAATATAGAGGTGTAACAAGGCATAGGTGGACTGGTAGATACGAAGCTCATCTATGGGACAACAGCTGCAAGAAAGAGGGCCAAGGAAGGAAAGGAAGGCAAGTTTATCTAGGGGGTTATGATATGGAAGAAAAAGCTGCAAGAGCTTATGATATGGCCGCACTCAAGTATTGGGGACCCTCCTCCCATATAAATTTCCCTTTGGAAAATTATCAAAACGAACTTGAGGAAATGAAGAACATGACGAGACAAGAATATGTAGCTCATTTACGAAGGAAAAGCAGCGGATTCTCAAGAGGGGCCTCCATGTACAGAGGAGTAACAAGGCACCACCAACACGGAAGGTGGCAAGCTCGAATTGGAAGAGTGGCTGGAAACAAAGATCTATATCTTGGAACCTTCAGTACCCAAGAGGAAGCAGCTGAAGCCTATGACATTGCTGCTATTAAATTCAGAGGAGTTAATGCTGTTACAAACTTTGATATAACAAGATATGACGTGGAAAGAATTATGGAGAGCAATAACCTTCTTAGTAGTGAACAAGCTAAGCGGAAAAGAGAGATGGATGATGGAACTAGAAGCGAGGCTACAGTTAACCAAAAACCTTGTACTACTCAAGAAACCGTTCTGATGCAGAAAAGATGCAGAAGCCAATCAGAATGGAAGATGGTTCAGTATCCATCCTCCCAACAGCTTGATCAGAATCCACAAAGAATTGAGTGTAGTAGAACTGAGTCCTTGTCAACTGCTTTAGATAACATGTTTCATCACCAAGTTGAGGAATCGAGTAACATGGGAACACACTTGTCAAATCCTTCTTCTCTGGTGACAAGTTTGAGTAGCTCAAGAGAAGAGAGCCCAGATAAGACAAGCTTGCCAATGCTCTTTGGAATGCCTTCAACAGTGTCCAAATTATTGGCTGACGTGGATTCTTTGGATCTATCTTCCAATCTCAGGCCTTCGCTTTCTATTCCTCAGATGCCAATTTTTGCTGCTTGGACCGATGCATAA 1839 0.4214 MKPIENGNTVNINYQNSWLGFSLSPQMINIGVPSHLHQTQPSPAAVETVPPSFYHHTPLHSYGSYYGLEGEHVGLSSSLPIMPLKSNVSLSGIEALSRSQAQATITTSAMHPRLNNMLYNQLLCHGLNNPNNLNHIQENISQQQFSYYSTLRNHDMILEGSKHQLPCIAEDENPGLKSWFSRDFPARHGEESRMIVPLEDNNGGESGSIGSITYGDLHSLNLSVSPTSGSSCVTSSPAITNTVATDTKKRGLQMVDQNQKQIGHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQGRKGRQVYLGGYDMEEKAARAYDMAALKYWGPSSHINFPLENYQNELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVERIMESNNLLSSEQAKRKREMDDGTRSEATVNQKPCTTQETVLMQKRCRSQSEWKMVQYPSSQQLDQNPQRIECSRTESLSTALDNMFHHQVEESSNMGTHLSNPSSLVTSLSSSREESPDKTSLPMLFGMPSTVSKLLADVDSLDLSSNLRPSLSIPQMPIFAAWTDA 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00417 612 SUPERFAMILY DNA-binding domain 276 345 IPR016177 GO:0003677
Gma11g00417 612 Pfam AP2 domain 380 429 IPR001471 GO:0003700|GO:0006355
Gma11g00417 612 Pfam AP2 domain 277 335 IPR001471 GO:0003700|GO:0006355
Gma11g00417 612 ProSiteProfiles AP2/ERF domain profile. 379 437 IPR001471 GO:0003700|GO:0006355
Gma11g00417 612 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 154 610 - -
Gma11g00417 612 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 14 118 - -
Gma11g00417 612 Gene3D AP2/ERF domain 276 345 IPR036955 GO:0003700|GO:0006355
Gma11g00417 612 Gene3D AP2/ERF domain 379 439 IPR036955 GO:0003700|GO:0006355
Gma11g00417 612 MobiDBLite consensus disorder prediction 455 470 - -
Gma11g00417 612 ProSiteProfiles AP2/ERF domain profile. 277 343 IPR001471 GO:0003700|GO:0006355
Gma11g00417 612 PRINTS Ethylene responsive element binding protein signature 278 289 IPR001471 GO:0003700|GO:0006355
Gma11g00417 612 PRINTS Ethylene responsive element binding protein signature 419 439 IPR001471 GO:0003700|GO:0006355
Gma11g00417 612 MobiDBLite consensus disorder prediction 539 564 - -
Gma11g00417 612 MobiDBLite consensus disorder prediction 539 569 - -
Gma11g00417 612 CDD AP2 378 439 IPR001471 GO:0003700|GO:0006355
Gma11g00417 612 CDD AP2 276 343 IPR001471 GO:0003700|GO:0006355
Gma11g00417 612 SMART rav1_2 379 443 IPR001471 GO:0003700|GO:0006355
Gma11g00417 612 SMART rav1_2 277 349 IPR001471 GO:0003700|GO:0006355
Gma11g00417 612 SUPERFAMILY DNA-binding domain 378 438 IPR016177 GO:0003677
Gma11g00417 612 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 154 610 - -
Gma11g00417 612 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 14 118 - -
Gma11g00417 612 Coils Coil 344 364 - -
Gma11g00417 612 MobiDBLite consensus disorder prediction 454 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00417 Gma-Chr11 3463220 3466913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00417 8 612 AP2-EREBP Transcription Factor Family AT4G37750 42.814 7.41e-143 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gma11g00417 AP2 5.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00417 K09285 - gmx:100794433 1195.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01989 01 55309208 55312633 Gma11g00417 11 3463220 3466913 GST
Gma11g00417 11 3463220 3466913 Gma17g01451 17 13820814 13824739 PCT
Gma11g00417 11 3463220 3466913 Gma05g01095 05 31224989 31229198 PCT
Gma17g01451 17 13820814 13824739 Gma11g00417 11 3463220 3466913 PCT
Gma05g01095 05 31224989 31229198 Gma11g00417 11 3463220 3466913 PCT