Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00414 ATGGGAAGAGCTCCTTGCTGTGACAAAGCCAACGTGAAGAAAGGTCCATGGTCACCTGAAGAAGATGCCAAACTCAAGTCTTATATTGAGCAGCATGGCACTGGTGGAAACTGGATTGCCTTGCCCCAGAAAATAGGCCTTAAGAGGTGTGGGAAAAGCTGTCGTCTTAGATGGCTGAATTATCTTCGCCCAAACATCAAACATGGGGGTTTCTCAGAAGAAGAAGACAACATCATCTGCAGCCTCTATGTTAGTATTGGAAGCAGGTGGTCAATTATAGCAGCACAGTTACCCGGGCGCACAGACAATGATATAAAGAACTATTGGAACACTAGGCTGAAGAAGAAGCTCCTTGGCAAACAAAGGAAGGAGCAACAGGCTCAAGCTCGCCGAGTCAGCAACAACCAGCAGAAGCAAGATGTCAAAAGAGAAACCGAGAATTTGATAGTGGCTTCTGAAGTCATGATCAATCAAGTTCCCTATTGGTCTTCTTCAGAGTTTTCTTCTGTGCCTATGCCAGTGACCAATGCTTCTTCATTTCAACACTATGGTCTGAACAATCAAACATCTCTCAGGAGCATGATGGTTAACAAACTAGAGGGAATTACATTTTCCAACGATCATCATCAGCAGCCACAGCAACCATACACCAATGGATGTGAAATTCCCTACCTACAAGACCAGGTTTTTCCAACCATGGTAAATCATGTAACCGTGGTGAGTAATGAAAACAATAGTGTCACCTATCAGCCATCAAATATATTTCAAGGGTTTGAAAACTTCCCAAGTGATTTTTGTGAACTGGTCTGTGTCAACCCGCAACAAATGGAGGGTTTTAATTATGGAATGGAATCAATGGACATGAGTATGAGCAATGGTGGTAGCACGAACACGACTTCAACAGAAAGCACTAGTTGGGGTGAAATGAGTTCCTTGGTTTATTCTCCTTTGGTTGCTGACTATGAAGGTTGCCGACAAGGAATAATTGCTCAAGATCATGTTGTTGCTTTCGAAGAGTGTAAGTACTTTGGAATGCAGATGCAATAA 1047 0.4298 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKQRKEQQAQARRVSNNQQKQDVKRETENLIVASEVMINQVPYWSSSEFSSVPMPVTNASSFQHYGLNNQTSLRSMMVNKLEGITFSNDHHQQPQQPYTNGCEIPYLQDQVFPTMVNHVTVVSNENNSVTYQPSNIFQGFENFPSDFCELVCVNPQQMEGFNYGMESMDMSMSNGGSTNTTSTESTSWGEMSSLVYSPLVADYEGCRQGIIAQDHVVAFEECKYFGMQMQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00414 348 CDD SANT 71 113 IPR001005 -
Gma11g00414 348 Gene3D - 70 146 - -
Gma11g00414 348 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Gma11g00414 348 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Gma11g00414 348 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Gma11g00414 348 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Gma11g00414 348 PANTHER TRANSCRIPTION FACTOR RAX3-LIKE 1 329 - -
Gma11g00414 348 CDD SANT 16 62 IPR001005 -
Gma11g00414 348 PANTHER OS09G0431300 PROTEIN 1 329 - -
Gma11g00414 348 Gene3D - 7 68 - -
Gma11g00414 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Gma11g00414 348 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Gma11g00414 348 SMART sant 67 115 IPR001005 -
Gma11g00414 348 SMART sant 13 64 IPR001005 -
Gma11g00414 348 MobiDBLite consensus disorder prediction 119 143 - -
Gma11g00414 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00414 Gma-Chr11 3405220 3407155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00414 1 315 MYB Transcription Factor Family AT3G49690 48.182 6.30e-89 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma11g00414 Myb_DNA-binding 2.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00414 K09422 - gmx:106795158 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01992 01 55373493 55374670 Gma11g00414 11 3405220 3407155 GST
Gma11g00414 11 3405220 3407155 Gma17g01448 17 13761490 13763224 PCT
Gma11g00414 11 3405220 3407155 Gma05g01104 05 31408260 31409794 PCT
Gma17g01448 17 13761490 13763224 Gma11g00414 11 3405220 3407155 PCT
Gma05g01104 05 31408260 31409794 Gma11g00414 11 3405220 3407155 PCT