Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma11g00402 ATGAAGAACAAGAGGACCTATCTCCGTGCTTCCCTTTTTCTCACTCACGAGGGGAGGAGCCACTCAAGTACTGGTTTATCTCAAGTTTTGTCCCTCGAGACAGAGACTCAAATTCTACTGCGGGTCAAGAACACTCAGCTTGAAGACAAAAACAAGAGTCTCAAAAACTGGGTGCCCAACACCGACCTCAACCCCAGCAGCTGGACCGGCATTACCTGCGACTCACGAATTCACTCACTTGTCTCCATTGACCTCTCCGAAACTGGAGTCTACGACGAGTTCCCCTTCGGTTTTTGTCGCATTCACACCCTCCAAAGCCTTTTCGTGGCTTCCAATTTCCTCACCAACTCAATCTCCCTCAACTCTCTGCTTCTCTGTTCCCACCTCCGTCTCTTGAACCTCTCCGACAATTATTTCGTCGGAGTCCTGCCGGAATTCCCGCCGGAGTtcaccgaattgagagagctagacctctcaaagaacaacttcaccggcgacattccggcgaGCAACCTCAGTGAGTTAACTCATTTGGAACTCGCTTACAACCCCTTCAAACCAGGACCTTTGCCTTCCCAACTAGGAAACCTCTCCAATCTCGAAACACTGTTCCTCGTCGATGTAAACCTCGTAGGGGAAATTCCACACTCCATCGGGAACCTCACCTCGCTCAAGAATTTCTATTTGTCTCAAAACTCCCTGTCAGGTAATATCCCAAACAGCATTTCAGGTCTGAAAAACGTTGAACAAATTAAACTTTTTCAGAACCAGCTTTCCGGCGAATTACCCCAAGGTTTAGGAAACCTGAGCAGTTTCATTTGCTTAGACCTCTCTCAGAACGCTCTCACGGGAAAACTACCAGACACAATCGCTTCATTGCATCTCTCTTCTCTCAACCTGAACGACAATTTTCTCAGGGGAGAAATTCCCGAAACTTCAACCAATGACTTGGTGGGAGAGTTGCCAAAGTATCTCTGCCAGGGGAACAAACTGGAGCATCTCATCACGTTCGTGAATCGCTTCTCTGGAACGCTCCCTCAACAATACGGCGAGTGTGGTTCACTTCAATATGTCAGAATCCAGAACAATCAGGGACTCACTAAACTCATTTTGTCCGGTAACAGCTTTTCTGACAATTTCCCAATAGAAATATGTGAACTTCAAAACCTCCTTGAGATTGACGTCAGCAAGAACCGCTTCACCGGTCAAGTTCCCACCTGCGTAACTAGGTTGATTAAGTTACAGAAACTTAGACTTCAAGATAACATGTTTACCGGCGAAGTTCCCAGGGAGATTCCGGTGAAGTTGACAAACTTGAGACTCAACCAATTCAACGTCTCTGGTAACAAGTTGCACGGGGTGGTTCCTTTAGGTTTCAACCGCCAAGTGTACTTGTCGGGTCTAATGGGAAACCCTGATCTCTGTAGCCCCGTTATGAAAACCCTGCCTTCGTGCTCCAAACGCAGGCCGTTTTCTCTGCTTGCTATTGTCGTTTTAGTTTGCTGCGTTTCGCTCCTCGTGGGGTCCACGTTGTGGTTCCTGAAGAACAAGACGCGTGGTTATGGCTGCAAATCCAAGAAGAGCTCTTATATGTCAACCGCGTTTCAGAGAGTGGGGTTCAATGAAGAAGACATGGTTCCGAACTTAACCGGTAACAACGTGATTGGCACAGGGAGTTCGGGTCGGGTCTACAGAGTGAGGCTCAAGACGGGGCAAACGGTGGCGGTGAAGAAATTGTTTGGTGGCGCGCAAAAGCCTGACATGGAAATGGTGTTCAGGGCCGAGATTGAGAGTCTGGGAATGATTCGGCATGCAAATATTGTGAAACTGTTGTTTAGTTGCAGCGTTGAAGAGTTTAGGATATTGGTGTATGAGTACATGGAGAATGGGAGCTTAGGGGACTTAGTGGATTGGTCTAGGAGAGTCGCAATTGCTGTGGGTGCGGCTCAGGGGTTGGCTTATTTGCACCATGATTCTGTGCCTGCTATTGTTCACAGAGACGTCAAGAGTAATAACATTTTGCTGGACCGTGAGTTTGTGCCCAGAGTAGCAGATTTTGGACTCGCTAAGACTTTGCAGCGTGAGGCCACCCAGGGTGCTATGTCCAGGGTTGCTGGATCATATGGTTACATTGCTCCAGTAAAAGTGACTGAGAAGAGCGATGTCTATAGTTTTGGGATGGTGCTGATGGAATTGATCACGGGCAAGAGGCCTAATGATTTTCCATTTGGTGAGAACAAGGATATAGTGAAGTGGATCACTGAGACTGTTTTATCACCATCTCCTGAAAGAGGAAGTGGCAATATTGGGATAGGAAAAGATTATATTATGAGCCAGATTGTTGATCCGAGATTGAACCCAGTCACTTGTGATTATGAAGAGATAGAGAGGGTTTTGTATGTGGCCCTACTCTGCACCTCAGCGTTTCCCATTAATAGACCCTCAATGCGAAGGGTGGTTGAATTGCTCAAGGACCATAAACTGTCATGA 2490 0.4602 MKNKRTYLRASLFLTHEGRSHSSTGLSQVLSLETETQILLRVKNTQLEDKNKSLKNWVPNTDLNPSSWTGITCDSRIHSLVSIDLSETGVYDEFPFGFCRIHTLQSLFVASNFLTNSISLNSLLLCSHLRLLNLSDNYFVGVLPEFPPEFTELRELDLSKNNFTGDIPASNLSELTHLELAYNPFKPGPLPSQLGNLSNLETLFLVDVNLVGEIPHSIGNLTSLKNFYLSQNSLSGNIPNSISGLKNVEQIKLFQNQLSGELPQGLGNLSSFICLDLSQNALTGKLPDTIASLHLSSLNLNDNFLRGEIPETSTNDLVGELPKYLCQGNKLEHLITFVNRFSGTLPQQYGECGSLQYVRIQNNQGLTKLILSGNSFSDNFPIEICELQNLLEIDVSKNRFTGQVPTCVTRLIKLQKLRLQDNMFTGEVPREIPVKLTNLRLNQFNVSGNKLHGVVPLGFNRQVYLSGLMGNPDLCSPVMKTLPSCSKRRPFSLLAIVVLVCCVSLLVGSTLWFLKNKTRGYGCKSKKSSYMSTAFQRVGFNEEDMVPNLTGNNVIGTGSSGRVYRVRLKTGQTVAVKKLFGGAQKPDMEMVFRAEIESLGMIRHANIVKLLFSCSVEEFRILVYEYMENGSLGDLVDWSRRVAIAVGAAQGLAYLHHDSVPAIVHRDVKSNNILLDREFVPRVADFGLAKTLQREATQGAMSRVAGSYGYIAPVKVTEKSDVYSFGMVLMELITGKRPNDFPFGENKDIVKWITETVLSPSPERGSGNIGIGKDYIMSQIVDPRLNPVTCDYEEIERVLYVALLCTSAFPINRPSMRRVVELLKDHKLS 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma11g00402 829 ProSitePatterns Protein kinases ATP-binding region signature. 555 578 IPR017441 GO:0005524
Gma11g00402 829 Gene3D Ribonuclease Inhibitor 314 362 IPR032675 -
Gma11g00402 829 Gene3D Ribonuclease Inhibitor 32 186 IPR032675 -
Gma11g00402 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 663 675 IPR008271 GO:0004672|GO:0006468
Gma11g00402 829 Gene3D Ribonuclease Inhibitor 363 484 IPR032675 -
Gma11g00402 829 Pfam Leucine rich repeat 198 258 IPR001611 GO:0005515
Gma11g00402 829 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 431 827 - -
Gma11g00402 829 Gene3D Ribonuclease Inhibitor 245 313 IPR032675 -
Gma11g00402 829 SUPERFAMILY L domain-like 57 311 - -
Gma11g00402 829 SMART serkin_6 549 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00402 829 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 14 312 - -
Gma11g00402 829 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 364 431 - -
Gma11g00402 829 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 312 364 - -
Gma11g00402 829 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 14 312 - -
Gma11g00402 829 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 364 431 - -
Gma11g00402 829 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 312 364 - -
Gma11g00402 829 SUPERFAMILY Protein kinase-like (PK-like) 544 823 IPR011009 -
Gma11g00402 829 Pfam Protein kinase domain 553 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00402 829 Gene3D Transferase(Phosphotransferase) domain 1 627 829 - -
Gma11g00402 829 Pfam Leucine rich repeat N-terminal domain 33 74 IPR013210 -
Gma11g00402 829 ProSiteProfiles Protein kinase domain profile. 549 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma11g00402 829 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 431 827 - -
Gma11g00402 829 SUPERFAMILY L domain-like 267 485 - -
Gma11g00402 829 Gene3D Phosphorylase Kinase; domain 1 524 626 - -
Gma11g00402 829 Gene3D Ribonuclease Inhibitor 187 244 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma11g00402 Gma-Chr11 3313605 3316973 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma11g00402 35 827 Receptor kinase-like Gene Family AT5G65710 45.812 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma11g00402 Pkinase 3.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma11g00402 - - gmx:100813889 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02007 01 55470242 55473642 Gma11g00402 11 3313605 3316973 GST